MAP Multiple Sequence Alignment Results



Page 1.1
                 1            15 16           30 31           45 46           60 61           75 76           90 
    1 gi|730305| MATHHTLWMGLALLG VLGDLQAAPEAQVSV QPNFQQDKFLGRWFS AGLASNSSWLREKKA ALSMCKSVVAPATDG GLNLTSTFLRKNQCE     90
    2 gi|404390| --------------- -------APEAQVSV QPNFQPDKFLGRWFS AGLASNSSWLQEKKA ALSMCKSVVAPAADG GFNLTSTFLRKNQCE     68
    3 gi|895868  MAALRMLWMGLVLLG LLGFPQTPAQGHDTV QPNFQQDKFLGRWYS AGLASNSSWFREKKA VLYMCKTVVAPSTEG GLNLTSTFLRKNQCE     90


Page 2.1
                 91          105 106         120 121         135 136         150 151         165 166         180 
    1 gi|730305| TRTMLLQPAGSLGSY SYRSPHWGSTYSVSV VETDYDQYALLYSQG SKGPGEDFRMATLYS RTQTPRAELKEKFTA FCKAQGFTEDTIVFL    180
    2 gi|404390| TRTMLLQPGDSLGSY SYRSPHWGSTYSVSV VETDYDHYALLYSQG SKGPGEDFRMATLYS RTQTPRAELKEKFTA FCKAQGFTEDSIVFL    158
    3 gi|895868  TKIMVLQPAGAPGHY TYSSPHSGSIHSVSV VEANYDEYALLFSRG TKGPGQDFRMATLYS RTQTLKDELKEKFTT FSKAQGLTEEDIVFL    180


Page 3.1
                 181         195 196         210 211         225 226         240 241         255 256         270 
    1 gi|730305| PQTDKCMTEQ    190
    2 gi|404390| PQTDKCMTEQ    168
    3 gi|895868  PQPDKCIQE-    189

Alignment Data (Fasta format)

>gi|730305|
MATHHTLWMGLALLGVLGDLQAAPEAQVSVQPNFQQDKFLGRWFSAGLASNSSWLREKKA
ALSMCKSVVAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVSV
VETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFL
PQTDKCMTEQ
>gi|404390|
----------------------APEAQVSVQPNFQPDKFLGRWFSAGLASNSSWLQEKKA
ALSMCKSVVAPAADGGFNLTSTFLRKNQCETRTMLLQPGDSLGSYSYRSPHWGSTYSVSV
VETDYDHYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDSIVFL
PQTDKCMTEQ
>gi|895868
MAALRMLWMGLVLLGLLGFPQTPAQGHDTVQPNFQQDKFLGRWYSAGLASNSSWFREKKA
VLYMCKTVVAPSTEGGLNLTSTFLRKNQCETKIMVLQPAGAPGHYTYSSPHSGSIHSVSV
VEANYDEYALLFSRGTKGPGQDFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFL
PQPDKCIQE-

mTo prepare a publishable output of this alignment, try the BOXSHADE server.
Copy the alignment output (highlighted in green) and choose 'other' for Input sequence format.

Kim C. Worley and Michael P. McLeod, Human Genome Sequencing Center, Baylor College of Medicine
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