# SCANPS Scan: Wed Feb 11 20:36:00 1998
# SCANPS Version: 2.3.1 (Fri Jul  4 16:16:41 BST 1997)
# Author:  G. J. Barton,  University of Oxford, UK
# Query file: 2104c4cd.seq
# Query ID: query_seq
# Query Title: Dummy title inserted by gseq_fasta                              
# Query Length: 239
# SCANPS MODE: 0
# Matrix file: /u/usr/local/blast/matrix/aa/blosum62
# Matrix title: NCBI Matrix - see file for type
# LD penalty:   1.00
# MAX number of scores output: 50
# MAX number of alignments output: 50
# MIN score to output: 371.86
# MIN score of alignments to  output: 371.86
# Database name: swall
# Created on: Wed Feb 11 11:17:53 1998
# Number of sequences: 230635
# Number of residues/bases in database: 73666403
# Score type: ln() scores
# FIT: m: 45.369389 c: -33.660942 var: 16.411936 nval: 207572
# PROBCUT: 1.001000
# Start_Scores: ----------------------------------------------------
   1  440  13.50 0.00352  SWALL:Q24764 Q24764 0.9-KB RNA TRANSCRIPT. 11/96               
   2  436  13.23 0.00498  SWALL:Q24484 Q24484 HYPOTHETICAL 29.6 KD PROTEIN. 5/97         
   3  383  10.22 0.237    SWALL:Q25175 Q25175 JUVENILE HORMONE BINDING PROTEIN. 11/96    
   4  394   9.85 0.38     SWALL:PON1_RABIT P27170 SERUM PARAOXONASE/ARYLESTERASE 1 (EC 3.1.1.
   5  368   9.50 0.596    SWALL:JHB_MANSE P15500 JUVENILE HORMONE-BINDING PROTEIN PRECURSOR 
   6  385   9.48 0.611    SWALL:Q96519 Q96519 PEROXIDASE ATP23A (EC 1.11.1.7) (MYELOPEROX
   7  377   9.43 0.652    SWALL:Q42784 Q42784 SEED COAT PEROXIDASE ISOZYME (EC 1.11.1.7) 
   8  382   9.43 0.652    SWALL:Q83122 Q83122 FIBER. 11/96                               
   9  370   9.43 0.652    SWALL:Q26300 Q26300 JUVENILE HORMONE BINDING PROTEIN (FRAGMENT)
  10  378   9.35 0.722    SWALL:VP35_NPVBM P31354 EARLY 35 KD PROTEIN (APOPTOSIS PREVENTING P
  11  384   9.28 0.79     SWALL:G2342666 G2342666 SEED COAT PEROXIDASE PRECURSOR (EC 1.11.1
  12  396   9.23 0.842    SWALL:Q51693 Q51693 PLASMID PTE702 (FROM BACILLUS ANTHRACIS (ST
  13  376   9.12 0.97     SWALL:G2649842 G2649842 HYPOTHETICAL 35.7 KD PROTEIN. 2/98       
  14  369   9.10 0.995    SWALL:Q57957 Q57957 FERREDOXIN OXIDOREDUCTASE, BETA SUBUNIT. 11
  15  379   8.94 1.22     SWALL:Q38877 Q38877 FLAVANONE 3-HYDROXYLASE. 11/96             
  16  363   8.93 1.24     SWALL:G2735656 G2735656 AMARANDIN-1 (FRAGMENT). 2/98             
  17  376   8.91 1.27     SWALL:TAL1_KLULA P34214 TRANSALDOLASE (EC 2.2.1.2). 10/94          
  18  378   8.90 1.29     SWALL:PON1_MOUSE P52430 SERUM PARAOXONASE/ARYLESTERASE 1 (EC 3.1.1.
  19  372   8.87 1.34     SWALL:YEIK_ECOLI P33022 HYPOTHETICAL 33.7 KD PROTEIN IN NFO-FRUA IN
  20  379   8.87 1.34     SWALL:FIBP_ADE09 P36846 FIBER PROTEIN. 11/97                       
  21  379   8.87 1.34     SWALL:G436055 G436055 FIBER PROTEIN. 1/98                       
  22  383   8.87 1.34     SWALL:G2384851 G2384851 R11G11.1 PROTEIN. 1/98                   
  23  374   8.84 1.39     SWALL:G2688719 G2688719 GTP-BINDING PROTEIN (OBG). 2/98          
  24  365   8.83 1.41     SWALL:D1023424 D1023424 MURD (FRAGMENT). 1/98                    
  25  363   8.82 1.42     SWALL:RS4E_YEAST P05753 40S RIBOSOMAL PROTEIN S4 (S7) (YS6) (RP5). 
  26  378   8.79 1.48     SWALL:E1227153 E1227153 FIBER PROTEIN. 2/98                      
  27  364   8.79 1.48     SWALL:E80999 E80999 CAP1 PROTEIN. 1/98                         
  28  364   8.79 1.48     SWALL:CAPA_YEAST P28495 F-ACTIN CAPPING PROTEIN ALPHA SUBUNIT. 6/94
  29  366   8.76 1.54     SWALL:YJIA_ECOLI P24203 HYPOTHETICAL 32.0 KD PROTEIN IN MRR-TSR INT
  30  376   8.75 1.56     SWALL:Q42546 Q42546 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (EC 3.1
  31  376   8.70 1.66     SWALL:FIBP_ADE08 P36845 FIBER PROTEIN. 11/97                       
  32  372   8.69 1.68     SWALL:G2460188 G2460188 POLYGALACTURONASE INHIBITING PROTEIN. 1/9
  33  366   8.68 1.7      SWALL:P72968 P72968 HYPOTHETICAL 32.6 KD PROTEIN. 2/97         
  34  372   8.68 1.7      SWALL:DHD2_LACCA P17584 D-2-HYDROXYISOCAPROATE DEHYDROGENASE (EC 1.
  35  367   8.67 1.73     SWALL:O07524 O07524 HYPOTHETICAL 33.8 KD PROTEIN. 1/98         
  36  364   8.66 1.75     SWALL:KRB2_VACCV P24362 POSSIBLE PROTEIN KINASE B12 (EC 2.7.1.-). 1
  37  374   8.66 1.75     SWALL:DHG_THEAC P13203 GLUCOSE 1-DEHYDROGENASE (EC 1.1.1.47). 11/9
  38  357   8.66 1.75     SWALL:HIS4_LACLA Q02131 PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CA
  39  357   8.66 1.75     SWALL:G2565146 G2565146 HISA. 1/98                               
  40  381   8.65 1.77     SWALL:Q24867 Q24867 ELONGATION FACTOR-1 ALPHA (FRAGMENT). 1/98 
  41  356   8.65 1.77     SWALL:YOF9_CAEEL Q09336 HYPOTHETICAL 27.2 KD PROTEIN ZK1290.9 IN CH
  42  373   8.64 1.79     SWALL:E285201 E285201 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (EC 3.
  43  357   8.64 1.79     SWALL:G2690194 G2690194 HYPOTHETICAL 28.1 KD PROTEIN. 2/98       
  44  362   8.63 1.82     SWALL:Q53085 Q53085 NODO. 11/96                                
  45  365   8.62 1.84     SWALL:YG4F_YEAST P42938 HYPOTHETICAL 33.3 KD PROTEIN IN ADE3-SER2 I
  46  369   8.62 1.84     SWALL:FIBP_ADE03 P04501 FIBER PROTEIN. 11/97                       
  47  374   8.62 1.84     SWALL:PON1_HUMAN P27169 SERUM PARAOXONASE/ARYLESTERASE 1 (EC 3.1.1.
  48  375   8.61 1.86     SWALL:Q96472 Q96472 FLAVANONE 3-HYDROXYLASE. 7/97              
  49  378   8.60 1.89     SWALL:G2649636 G2649636 BRANCHED-CHAIN AMINO ACID ABC TRANSPORTER
  50  375   8.59 1.91     SWALL:4HDB_CLOKL P38945 NAD-DEPENDENT 4-HYDROXYBUTYRATE DEHYDROGENA
# End_Scores: ------------------------------------------------------
# Start_Alignments_Rank: 1
# Query: query_seq Target: SWALL:Q24764 Number_of_Alignments: 1
# Target_Title: Q24764 0.9-KB RNA TRANSCRIPT. 11/96                                                                 
# N: 1 Raw_Score: 447 Query_Length: 239 Target_Length: 260 ln()_Score: 440
        *     **   *   ** . **  * * *   . *  .. .   * * . 
      1 C     LLX  S  XDA K FPEDP KPCXXGDGEX IM KLCNTLFSEN      36
      9 CLLWMGLLSWVSHRIDASQGFP SPLKRCKLQE ESCLVAQ AQTFF Q       53

         * . *  *     *   *.*  .*   *  * * * * * .   *  .*
     37 SA E GD PGLNLMQ   LDPLKVD  RMV I SQGESSSPVGITLTFTD      76
     54  AFQKG IP  E RQVAALEP  IDLGTM RIESGGHSES LKFKLVMSD      94

           ** . .   . * .*** . ** *  .*. *    *  *   *   *
     77  NLLYGIKDQR IXK VKGFGRXLTAKHEVKIVT   KTFSP   V GPY     116
     95 AK LYNLANS VVVKSLKGFTKDLT K PLKL TLLMDT  PELEVRAKY     137

        .. **.***** *  *  ..*  * * *   * * . . .* **  .* .
    117 NIQGKVLILPI SGTGQSNMT  MVN V   RAIVSFSGKPLVK  NGET     157
    138 DVDGKLLILPIVS KG  DLTIRM NEVQTKRRI T A EP VKRSDGHS     179

        **..** * ** *  .  *.  ****. * * * .. . * ** * *.  
    158 YLDVTDLK ITMKP ESSHYHFSNLFNGD KALGDN MNVFLN E NSE      200
    180 YLNITDYKTIT K IKGGHFDLSNLFD DNKELRESTLKV LNQEWNT L     224

        *  .  *  * *  **    * .    ...  . . .** .** * *
    201 A  IY K  ETA  KAIDRSFGKLYLGVVKGVI SKLPYAKFF ADE     238
    225 ALDVQPKINE ACSKA    F R   AILQS LWANIPYDEFFKA E     260

# End_N: 1
# End_Alignments_Rank: 1
# Start_Alignments_Rank: 2
# Query: query_seq Target: SWALL:Q24484 Number_of_Alignments: 1
# Target_Title: Q24484 HYPOTHETICAL 29.6 KD PROTEIN. 5/97                                                           
# N: 1 Raw_Score: 445 Query_Length: 239 Target_Length: 265 ln()_Score: 436
        **   *   ** . **  * * *   * *  . *    * * . .*   *
      2 LLX  S  XDA K FPEDP KPCXXGDGEXIMKL  CNTLF S ENSAEG      40
     15 LLSWVSCRVDASEGFP SPLKRCKLQD ESCL LAQAQTFFQAFKN   G      58

          *    *         *    * * * * * * .   ** .*   ** .
     41 D P    GLNL MQLDPLKVDRMVI SQGESSSPVGITLTFTD NLLYGI      82
     59  IPERQSG RAGAH SAL  GTMFIESGGHSES IKFKLTMSDAK LYNL     101

             . * .*** . ** .  .*. *    .*   *   *.. **.***
     83  KDQRIXK VKGFGRXLTAKHEVKIVTKTF SP   V GPYNIQGKVLIL     125
    102 ANSMMV KSLKGFTKDLT R PLKL TLLLDNPELEVRAKYDVDGKLLIL     147

        ** *  *  ..*. .* *   . .. . .* **  .* ***..** *  *
    126 PI SGTGQSNMTM VN VRA I VSFSGKPLVK  NGETYLDVTDLK IT     167
    148 PIVS KG  DLTIRLNDVHTKVWIT A EP VKRSDGHTYLNITDYKTAT     191

         .*   * * *.  ***** * * * *. . * ** *  *  *  .  * 
    168  MK   PESSHYHFSNLFNGD KALGDN MNVFLN EN SE A  IY K      204
    192 KIKGSSP SGHFDLSNLFN DNKELRDSTLKV LNQE WSTLALDVQPKI     237

         *  ***    *      .*.  . . .** .** . *
    205  ET AKAIDRSFGKLYLGVVKGVI SKLPYAKFFAD E     238
    238 NEACAKA    F S   AIVQS LWANIPYDEFF EKE     265

# End_N: 1
# End_Alignments_Rank: 2
# Start_Alignments_Rank: 3
# Query: query_seq Target: SWALL:Q25175 Number_of_Alignments: 1
# Target_Title: Q25175 JUVENILE HORMONE BINDING PROTEIN. 11/96                                                      
# N: 1 Raw_Score: 384 Query_Length: 239 Target_Length: 242 ln()_Score: 383
        *.* * .   *   .  **   *   * * *  * *  * * .  *  * 
      1 CLLXSXD AKFPE DPKPCXXGDGEXIMKLC  N T LFSENSAEGD PG      43
     15 CVL S EGGVF  FN  PCYKSD   I K CLSNATETFLEKTCNG YP       51

         *  .. .*** *  . ..*.   *  * .*  * * *  *. . *.*.*
     44 LNL MQ LDPLKV  D RMVISQGESSSPVGITLTFTD  NL LYGIKDQ      85
     52  NTEIKAIDPL VIPELKVVV D E  S MG  LVF DFKNINIVGLKNQ      91

        .*     * . . * *   * .* **   .   **   *   * *   * 
     86 RIXKVKGFGRXL TAKHEVK IVTKTFSPVGPYNIQGKVLI LPISG TG     131
     92 QI   SDF K MDTDK   KSVVLKT KAI  LNI   V ADLKIE FTK     125

        *      * .  * *.* * . *    * . *    *  *   * .   *
    132 QSNMTMVNVRAIVSFSGKP LVK N  GET Y LDVTDLKITMKPESSHY     175
    126 Q      N K  V FNG PYIAKATALGSSQYGYSFT  K   K DDKEY     158

         *   *  *   .  *  * . .*. .    **. ...*.   * * * *
    176 HF   S  N   LFNG  D KALGDNM NVFLNE NSEAI   YKETA K     208
    159  FVVGSEENACEII GEPDVE IGEELQKALLNDADAKAMKPDY E ANK     203

         *. *   * *       *. *.  .  ..** *  *  ** *
    209  AIDRSFGK L       YLGVVKGV  ISKL PYAK  FFAD     237
    204 VAL RK  KTLCHIVEAAYVTVIHNIRAVAKLFP  KEAFFLD     241

# End_N: 1
# End_Alignments_Rank: 3
# Start_Alignments_Rank: 4
# Query: query_seq Target: SWALL:PON1_RABIT Number_of_Alignments: 1
# Target_Title: P27170 SERUM PARAOXONASE/ARYLESTERASE 1 (EC 3.1.1.2) (EC 3.1.8.1) (PON 1) (SERUM ARYLDIAKYLPHOSPHATA
# N: 1 Raw_Score: 424 Query_Length: 239 Target_Length: 358 ln()_Score: 394
        * * .  *  *  *        *  * . * *    * * * *  .. * 
      2 L LXS XDA K  F P      E DP K P C  XXG D G EXIMK LC      29
     11 LGL ALFDGQKSSFQTRFNVHREVTPVELPNCNLVKGIDNGSED LEIL       57

         * * *    **  .  *      * **  * ** *   **. * . . *
     30  NTL FSEN SA  E  G      D PG  LNLMQL   DPLKV DRMVI      59
     58 PNGLAF   ISAGLKYPGIMSFDPDKPGKIL LMDLNEKDPV VLE LSI     101

        . *   . ** .*  **. ***  **..*    .   * .  . .. * *
     60 SQG   E SS SPV GITLTFT  DNLLYG   IK  DQR  IXKV KGF      93
    102 T GSTFDLSSFNP HGIS TFTDEDNIVY LMVVNHPDSKSTV ELFK F     145

         .    * * * ..  **      *       ***   *  *      * 
     94 GRXLTAKHEVK IV TKTF  S  P       VGP   Y  NIQGKVLIL     125
    146  Q   EK E KSLLHLKTIRHKLLPSVNDIVAVGPEHFYATN D HYFI      186

         * . *     *   *  .*    * ** .*.    * .*  . .  .*.
    126  P I S     GTGQSN MTMV  N VRAIVS    F SGKPL VK NGE     156
    187 DPYLKSWEMHLGLAWS FVTYYSPNDVR VVAEGFDFANG  INISPDGK     232

         *.  . . *  **         *. * . *   * * *  *       *
    157 TYLD VTD L  KI         TMKP ESSHYHFSN LF N       G     183
    233  YV YIAELLAHKIHVYEKHANWTLTPLK S LDF NTLVDNISVDPVTG     277

        *  *  *   * * .*  . .*   **      *  **   * * * . .
    184 DKAL  G  DN MNVF LN EN   SEA     IY KE   T AKAIDRS     213
    278 D  LWVGCHPNGMRIFYYDPKNPPASEVLRIQDILSKEPKVTVAYA E N     323

         * . * *  *  * **   *  .  * * *      * *
    214 FGKLYL G  V  V KG   V  I SK LPYAKFFADE S     239
    324  GTV LQGSTVAAVYKGKMLVGTVFHKAL Y    C ELS     355

# End_N: 1
# End_Alignments_Rank: 4
# Start_Alignments_Rank: 5
# Query: query_seq Target: SWALL:JHB_MANSE Number_of_Alignments: 0
# Target_Title: P15500 JUVENILE HORMONE-BINDING PROTEIN PRECURSOR (FRAGMENT). 2/94                                  
# End_Alignments_Rank: 5
# Start_Alignments_Rank: 6
# Query: query_seq Target: SWALL:Q96519 Number_of_Alignments: 1
# Target_Title: Q96519 PEROXIDASE ATP23A (EC 1.11.1.7) (MYELOPEROXIDASE). 2/97                                      
# N: 1 Raw_Score: 410 Query_Length: 239 Target_Length: 336 ln()_Score: 385
        *   * *   * .* *      *  *     *   * * . *       *
      1 CLLXSXDAKFP ED P      K PC XXG DGEXIMK L C       N      30
     18 C F SFDT  PGKDLPLTLDYYKSTCPTV FD  VIKKEMECIVKEDPRN      60

              * *  .   .* * *  * *   . *  .    *    *   * 
     31  T    L FSENS AEG DPG  LNL  MQ L  D    P    L   K       53
     61 AAIIIRLHF HDCFVQGCD GSVL LDETETLQGEKKASPNINSLKGYKI     107

        ***.  .*   **  * *. ..  * **  * .*  *  * * .     *
     54 VDRM  VISQGESSSPVGITLTFTDNLL YGIKDQRIXKVKG F     G      94
    108 VDRIKNII   ESECP GV VSCAD LLTIGARDATIL VGGPYWDVPVG     150

        *    ** .*  . * *   .*  *        *. **  *  .. * * 
     95 R  XLTAKHEVKIVTKT F SP VG      P YNIQG KV  LI LPIS     128
    151 RKDSKTASYE  LAT TNLPTPEEGLISIIAKFYS QGLSVEDMVAL I      194

        *  * *..     * *. *   *   *   * * . ****  . *. *  
    129 G  T GQSNMTMVNVRA IV SF   SG KPLVKNGETYLDVTDLK ITM     168
    195 GAHTIGKA QCR NFRSRIYGDFQVTSALNP V S ETYL AS LREI C     236

         * .*    *    **    *. **.  *.*  .**  **  *   . * 
    169 KPESSHYHFSNLFNGD K  ALGDNM  NVFLNENSEAIYKETAKAIDRS     213
    237  P AS    SG  EGDSNVTAI DNVTPNLF  DNS  IY HT  LL RG     269

          *      ..*  * *.  . ..**  **.    ** .. *
    214 F G      KLY  L GV VKGVISKLPYAK    FFADE S     239
    270  EGLLNSDQEMYTSLFGIQTRRIVSK  YAEDPVAFF EQFS     307

# End_N: 1
# End_Alignments_Rank: 6
# Start_Alignments_Rank: 7
# Query: query_seq Target: SWALL:Q42784 Number_of_Alignments: 1
# Target_Title: Q42784 SEED COAT PEROXIDASE ISOZYME (EC 1.11.1.7) (MYELOPEROXIDASE) (FRAGMENT). 5/97                
# N: 1 Raw_Score: 389 Query_Length: 239 Target_Length: 283 ln()_Score: 377
        *  *   *   * **  .. *  *  *.  * * * *  * .* . . **
     10 FPEDPKPC XXG DGEXIMKLC N  TLFSENSAEGD  PGLN LMQ LD      50
      1 F HD   CFVQGCDG SVL L NNTDTI  E S EQDALPNINSI RGLD      38

         . * * .  .   *.* *   *..  * .*  *  . *  *   . *. 
     51 PLKV D RMVISQGESSSPVGITLTFTDNLLYGIKDQRIXKV   K GF       93
     39  V VNDIKTAV   ENSCP D TVSCAD IL AIAAE IASVAGRRSGWP      78

           * *  *** .  . .  .   *  * .*. *  *    *  *  . *
     94    G R XLTAKHEVK IVTKTFSPVGP YNI QG K    V  L  I L     125
     79 VPLGRRDSLTA N  RTLANQNL P APFFNLTQ LKASFAVQGLNTLDL     122

          .* * * *..   * .* * . .**  *  *. .  . ***.*     
    126  PIS G T GQSN MTMVNVRAIVSFS  GKPLVKNG E TYLDV          161
    123 VTLSGGHTSGRARCSTFIN R LYNFSNTG  LI H LDTTYLEVLRARC     166

            * * *  . .  * .  . * .** *  **    *  . .  * * 
    162     T D L KITMK P E SSHYHFSN L FNG    D  K AL G D      189
    167 PQNATGDNLTNLDLSTPDQFDNRY YSNLLQLNGLLQSDQERFSTPGADT     215

                * * * . *   *  * *       *  .  * *   .*  *
    190         NMNVFLNEN   SEAIYK  E    TA KA IDR   SF  G     215
    216 IPLSIASANQNTFFS NFRVS MI KMGNIGVLTGDEGEI RLQCNFVNG     261

           . *.   * **   *  *  * .*
    216  KLYLGVVKGVISKLPYA  KFFADES     239
    262 DS F GLA SVASK D AKQKLVA QS     282

# End_N: 1
# End_Alignments_Rank: 7
# Start_Alignments_Rank: 8
# Query: query_seq Target: SWALL:Q83122 Number_of_Alignments: 1
# Target_Title: Q83122 FIBER. 11/96                                                                                 
# N: 1 Raw_Score: 403 Query_Length: 239 Target_Length: 319 ln()_Score: 382
        *  * .   .* **      *   *   *    **  .    .. * * *
      3 L XSXD AKFP ED      P  KPCXXG    DG  EX   IMKL C N      30
      7 LSTSFNPV YPYEDESNLQHPFINP   GFISPDGFTQSPNGVLSLKCVN      52

         * .  .*    * .* *   ***   . *  . *  *  . . . * **
     31 TLFSENSAEGDPGLNLMQLDPLKV DRM V ISQG  ESSSPVGI T LT      73
     53 PL T  TA  S G SL Q   LKVGSGLTVDTTDGSLE EN IKVNTPLT      89

          ..   ** .  *.. .* ..  *. *  *  **  . . . .  *  *
     74 F TD   NL L YGIK DQ RI XKVKGF GRXLT  AKHEVKIVTK  T     109
     90  KSNHSINLPIGNGLQIEQNKLCSKL G NG  LTFDSSNSIAL  KNNT     132

         .. *  *  *  *. *      *. *** . .* *   *  .* *    
    110  FS PVGP YN  IQ G      KV LILPI SGTGQ SN  MT M         137
    133 LWTGP KPEANCIIEYGKENPDSKLTLIL VKNG G IVNGYVTLMGASD     178

         **   .  *  *   *  *  * * * *     *   ** *   .*  .
    138  VNVRAIVSFSGKPL VK NG ETYLDVT     D   LKIT   MK PE     171
    179 YVN  TL  FKNK  NVSIN VELYFDATGHILPDLSSLK TDLQLKYKQ     220

        ..*.    *  *     *   *   * * ** * .*  .     *. *..
    172 SSHY  H F  S N L F   NGDKALG DNMN VFLNE   N SE AIY     203
    221 TTHFSARGFMPSTTAYPFVLPN   A GTDNENYIF GQCYYKASDGALF     265

          * *    * . * * *    *  *. *  *.     .  .* *  *. 
    204 K E T A  KAI D R S    FGKLY L  GV    VKG VI SKLPYA     232
    266 PLEVTVTLNKRLPDSRTSYVMTF  LWSLNAGLAPETTQATLITS  PFT     311

         * .   *.
    233 KF F A DE     238
    312  FSYITEDD     319

# End_N: 1
# End_Alignments_Rank: 8
# Start_Alignments_Rank: 9
# Query: query_seq Target: SWALL:Q26300 Number_of_Alignments: 0
# Target_Title: Q26300 JUVENILE HORMONE BINDING PROTEIN (FRAGMENT). 11/96                                           
# End_Alignments_Rank: 9
# Start_Alignments_Rank: 10
# Query: query_seq Target: SWALL:VP35_NPVBM Number_of_Alignments: 1
# Target_Title: P31354 EARLY 35 KD PROTEIN (APOPTOSIS PREVENTING PROTEIN). 11/97                                    
# N: 1 Raw_Score: 394 Query_Length: 239 Target_Length: 299 ln()_Score: 378
        *..      ** * *      . *   * *     . . *. *   *   
      1 CLLXSXDAKFP E D   P  KPCXXGDGE X   I M KLCN   T         31
      2 CVI      FPVEIDVSQTVIRDCHV D EQTRELVYINKIMNTQLTKPV      43

        *  *  * *  * *   .    * * . * .  ***     *  *   * 
     32 L  FSEN SAEGDP  GL    N LMQLDPL  KVDRMVISQG E S SS      66
     44 LMMF  NIS  G PIRSVTRKNNDL R DRIKSKVDEQ FDQ LEREYSD      84

         . *    * **. *  **.   .  .   * *  * . *  * *.    
     67 PV GITLTFTDNLLYGIKDQR  IX K   V KG FGRXLTAK HE V       103
     85 KIDG    FHDNIQY FKDEHYSVSCQNGSVLKSKFAKIL  KSHDYTDK     127

        * * *  * .  *  *  .*   .   * .* *  *   * **  ..   
    104 K IVT  KTFS P  VGPYN   IQGKVLIL PISG  TGQSN  MTM V     138
    128 KSIETYEK YCLPQLVDKHNDCYV A VCVLKP  GFENG SNQVLSFEY     171

        * .  . ** *. .  . *  *  * *  *   * *  *  *     .  
    139 N V  RAIVSFSGKPLVKN  G  ETY  L   D VT DL K     ITM     168
    172 NPIGNKVIVPFAHE  I NDTGLYE YDVLAYVDSVEFD GKQFEEFV Q     215

        *   * **   * *  . .* *      . **   *   ***  * * . 
    169 K   PESSHYHFSNLFNGDKALGDNMNVFLNE   NSEAIYK  E TAK      208
    216 KLILP SS   F N  DSEKVL      YYNEASKNKNMIYKALEFTTES     252

        . . .*  *  *..  * .  *    ** * * *   .  *
    209 A IDRS  FG KLYL G VV KGVI SK LPYAKFFAD ES     239
    253 SWV KSNKFNWKIFCNGFIYDK   KSKAL YVKLH NVTS     287

# End_N: 1
# End_Alignments_Rank: 10
# Start_Alignments_Rank: 11
# Query: query_seq Target: SWALL:G2342666 Number_of_Alignments: 1
# Target_Title: G2342666 SEED COAT PEROXIDASE PRECURSOR (EC 1.11.1.7). 2/98                                         
# N: 1 Raw_Score: 412 Query_Length: 239 Target_Length: 352 ln()_Score: 384
        *  *  .      ** *  **       .     *   * **  .. *  
      1 C  L  L XS  XDAKFPEDP       K    PC XXG DGEXIMKLC       29
     37 CPNLFPIVFGVIFDASF TDPRIGASLMRLHFHDCFVQGCDG SVL L N      82

        *  *.  * * * *  * .* . . ** . * * .  .   *.* *   *
     30 N  TLFSENSAEGD  PGLN LMQ LDPLKV D RMVISQGESSSPVGIT      71
     83 NTDTI  E S EQDALPNINSI RGLD V VNDIKTAV   ENSCP D T     120

        ..  * .*  *  . *  *     *.    * *  *** .  . .  .  
     72 LTFTDNLLYGIKDQRIXKV    KGF    G R XLTAKHEVK IVTKTF     110
    121 VSCAD IL AIAAE IASVLGGGPGWPVPLGRRDSLTA N  RTLANQNL     164

         *  * .*. *  *    *  *  . *  .* * * *..   * .* * .
    111 SPVGP YNI QG K    V  L  I L PIS G T GQSN MTMVNVRAI     143
    165  P APFFNLTQ LKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN R L     209

         .**  *   * *  *  ***.*         * * *  . .  * .  .
    144 VSFS  GK  P LVKNGETYLDV         T D L KITMK P E SS     173
    210 YNFSNTGNPDPTL  N TTYLEVLRARCPQNATGDNLTNLDLSTPDQFDN     256

         * .** *  **    *. *    * *    .* *  *.*   *    . 
    174 HYHFSN L FNG    DKAL    G DN   MNVF LNEN   S  E A      201
    257 RY YSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSM     305

        * *       *  .  * *   .*  *   . *.   * **   *  *  
    202 IYK  E    TA KA IDR   SF  G KLYLGVVKGVISKLPYA  KFF     235
    306 I KMGNIGVLTGDEGEI RLQCNFVNGDS F GLA SVASK D AKQKLV     348

        * .*
    236 ADES     239
    349 A QS     351

# End_N: 1
# End_Alignments_Rank: 11
# Start_Alignments_Rank: 12
# Query: query_seq Target: SWALL:Q51693 Number_of_Alignments: 1
# Target_Title: Q51693 PLASMID PTE702 (FROM BACILLUS ANTHRACIS (STRAIN DAVIS)) DEP GENE FOR ORF, COMPLETE CDS. 11/96
# N: 1 Raw_Score: 445 Query_Length: 239 Target_Length: 466 ln()_Score: 396
        *. * * *  *    *  *      **   *  *  .  *. .   *  .
      2 LLXSXDAK  F P  E DP      KPCXXG DGEXI  MK LC  N  T      31
     38 LIISKD KETFIDYRETTPYFTGNQKP HIGVPG FVAGMEYI HDNYGS      83

        *   *      * ** *   *  *  *.**   * ..  *.. .    **
     32 L FSE      NSAE G   DPGLNLMQLD   PLKV  DRM VI SQGE      63
     84 LPMGELLQPAINYAEKGFKVDDSLT MRLDLAKP RIYSDKLSIFYPNGE     131

           *.  *  **   **  *    .*  .* *   ***   *  * .  *
     64 SSSPV  GI TLTF TDNLLYG  IKDQRIXK  VKGF   G  RXL  T      98
    132    PIETG ETL IQTD  L ARTLK  KIQKEGAKGFYEGGVARAISKT     171

        **   * .   *. * *   ** * * . *  *     * ** *   *  
     99 AK H E V   KI VTKTFSPV GPYNIQG KVLIL  PISG TG  QSN     134
    172 AKISLEDIKGYKVEVRK   PVKGNY M GYDVYTAPPPFSGVT LLQ       213

        *  .     *  .*   *  .. * *   .  .      ** *.  *  .
    135 M TM     V  NV R AIVSF SGK  PL  V      KN GE TY  L     159
    214 MLKLAEKKEVYKDVDHTA  TYMS KMEEISRIAYQDRKKNLGDPNYVNM     260

        *    *.* * * *** *     * . *    **           * * *
    160 D    VTDLK I TMKPE     S S H   YHF           S N L     180
    261 DPNKMVSD KYISTMKNENGDALSEAEHESTTHFVIIDRDGTVVSSTNTL     309

           *  * *  * *   .* . * *  .*  ** *         *  .  
    181    F NGDK  ALG   DN M NVFL NE  NS E         A  IY      203
    310 SNFFGTG KYTA GFFLNNQLQN F GSEGFNSYEPGKRSRTFMAPTVLK     355

        *  **    .    .       * *. .  **  *               
    204 K  ET    A    K     A I DRSF  GK  L                    217
    356 KDGETIGIGSPGGNRIPQILTPILDK YTHGKGSLQDIINEYRFTFEKNT     404

         *    *   *   .  **. .  *. * * **    *   **
    218  Y    L G V   V  KGV I SKL PYAKFF    A   DE     238
    405 AYTEIQLSSEVKNELSRKGLNVKKKVSP A FFGGVQALIKDE     445

# End_N: 1
# End_Alignments_Rank: 12
# Start_Alignments_Rank: 13
# Query: query_seq Target: SWALL:G2649842 Number_of_Alignments: 1
# Target_Title: G2649842 HYPOTHETICAL 35.7 KD PROTEIN. 2/98                                                         
# N: 1 Raw_Score: 395 Query_Length: 239 Target_Length: 312 ln()_Score: 376
        *  * . * **  *    * *  * *. **    *  *   ** *     
      5 SXDA K FPEDP KPCXXG D GEXIM KLC NTL  F  SENSA           38
      6 SL ANQIF ED YK  DYGVDRKE IVEKL RKLLIEFRVPENEAVRTIR      48

             * * *  .    .  . .. .*  * *  .  ** *  *****  
     39      E GDPG L   NL  M QL DPL K VD R MVISQ GESSSP        67
     49 NYIIREYGAPATVRRERITKIEEIKEP NKWVTVKAKVI QLWESSSPSI      96

          ** *   *  . *   *..     *   *. .  * .   *   * * 
     68   VG I   T  LTFTDNLLY  GI K   DQ R  IXK   V K GFG       94
     97 AQVGLIGDETGYIRF   LVWTKA KKQPVDEGKSYIFRNVVVDDYG GV     141

         * *  * *  *. .*   * *   *  *     ...  *  *.  *   
     95  RXL  TAK HEV KI   VTKTFSPVGP  Y  NIQ  GKVLILPI SG     129
    142 LR LNVT KISEIEEIEEDV KV KP  PEELSEDVEVVG ALV AIQQN     183

        .*  *   . *   * * ..   ** *  ..*.*   *  **.*  *   
    130 TG  QSNMTMV   NVRAIVSFSGK PLVKNGETYL DVTDLKITMK P      170
    184 SGLIQ RCS VEGCN R VIKM GKCP  EHGKTKAKD  DLRI  KGVL     222

        .   *  .   . *  * . .* *  .*  * * .. * .**  . *.  
    171 ESSHYH FSN LFN  G DKAL GDNMNVFLNENSEAIYKETA K AI       210
    223 DDG YRTY EVIINEEGVE SLTG  IN  L EKAKKIAEETLDRGAVLT     264

        . .    ** ** ** *  .  * *  **   **  *   *
    211 D RS  FGKLYLGVVKGVISKLP Y  AK   FF AD   E     238
    265 ELKKMLLGK YLRVV GT A TPRYLIAKHVEFFRPDIRKE     301

# End_N: 1
# End_Alignments_Rank: 13
# Start_Alignments_Rank: 14
# Query: query_seq Target: SWALL:Q57957 Number_of_Alignments: 0
# Target_Title: Q57957 FERREDOXIN OXIDOREDUCTASE, BETA SUBUNIT. 11/96                                               
# End_Alignments_Rank: 14
# Start_Alignments_Rank: 15
# Query: query_seq Target: SWALL:Q38877 Number_of_Alignments: 1
# Target_Title: Q38877 FLAVANONE 3-HYDROXYLASE. 11/96                                                               
# N: 1 Raw_Score: 408 Query_Length: 239 Target_Length: 358 ln()_Score: 379
        *  *   *  ..**   ** .*          *.  * .**.   *   *
      2 L  LX  S XDAKF  PEDPKPCXXGDGEXIMKLC NTLFSENSAEGD P      42
      6 LTELAGESKLNSKFVRDEDERP          KVAYN VFSD   E  IP      39

          ..*  .* .  *   .  * .. .  *.      *  *. * *   * 
     43 G LNLMQLDPL  K   VD RMVISQG ES S  SPV  GI T LTFTD       76
     40  VISLAGIDDVDGKRGEI CRQIV EACENWGIFQVVDHGVDTNLV ADM      85

          *    . .  .*. *  .   * ** *  . . *   * *   . ***
     77  NL   LYGI  KDQ R  IX  KVKGFGRXLTAKH   E V   K IVT     107
     86 TRLARDFFALPPEDKLRFDMSGGK KG G FIVSSHLQGEAVQDWREIVT     132

          ** **    *    *   .*  **          *   .* . *   *
    108 KTFS PV G PY    NI  QG  KV          L   ILPI S GTG     131
    133  YFSYPVRNRDYSRWPN KPEGWVKVTEEYSERLMSLACKLLEVLSEAMG     180

           .* .*  *  *    . .*. .  *   *   * .*   . *  *  
    132    QSNMTMVN  V    RAIVS FSGK   P   L VK   N GE T Y     158
    181 LEKES LT  NACVDMDQKIVVNYYP KCPQPDLTLGLKRHTDPGTITLL     226

        * * *     * *   *  **..* * .   .   *  ** **  * * *
    159 L D V     T DL  K  ITMKP E S   S   HY HF SN LF NGD     184
    227 LQDQVGGLQATRD NGKTWITVQPVEGAFVVNLGDH GHFLSNGRFKNAD     274

         .* .  *   ...  *  .* . .* .*  *  *   *** .   .* .
    185  KA LGDN   MNV  FLNEN S EA IY  K  ETA KAI DR  SFGK     216
    275 HQAVVNSNSSRLSIATF  QNPAPDATVYPLKVRE GEKAILEEPITFAE     321

        .*   .*  . . .  . **  **   .*
    217 LY   LG  V V KGVISKLPYAKFFADE     238
    322 MYKRKMGRDLELAR  LKKL  AK   EE     343

# End_N: 1
# End_Alignments_Rank: 15
# Start_Alignments_Rank: 16
# Query: query_seq Target: SWALL:G2735656 Number_of_Alignments: 0
# Target_Title: G2735656 AMARANDIN-1 (FRAGMENT). 2/98                                                               
# End_Alignments_Rank: 16
# Start_Alignments_Rank: 17
# Query: query_seq Target: SWALL:TAL1_KLULA Number_of_Alignments: 1
# Target_Title: P34214 TRANSALDOLASE (EC 2.2.1.2). 10/94                                                            
# N: 1 Raw_Score: 399 Query_Length: 239 Target_Length: 333 ln()_Score: 376
        * .  *   **    *   *    *     * *  * * *        * 
      5 SXD  A   KF  P EDP KPCXXG     D G  EXIMKL    C  N       30
      1 S EPSAKKQKFANSLE ALK  ATGTTVVADTGDFESIAKFTPQDATTNP      46

        .  *       ...  .** . *   * *.  *.. . **.... . * .
     31 T  L       FSE  NSA E G DPGLNL MQLDPLKVDRMVISQ GES      64
     47 SLILAAAKQQAYAKLIDSAVQYGKKQGQNIDEQVE IAVDKLLV EFG T      93

        .     * * . *     *.*  *      *    **   ** ** *.  
     65 S  S  PVG I T     LTF TD    N L    LY   GI KDQRI X      88
     94 AILKVVP GRVSTEVDARLSFDKDATVKKALEIIKLYEAEGISKD RVLI     141

        *.    .*    . *  * *.. . .*  **    .  *  *     .  
     89 KV    KGF  GRXLTAK HEVKI VTKTFSPVGPYNIQGKVLILPISGT     130
    142 KIASTWEGIQAAQEL EKEHDIHVNLTLLFS    F AQA V     A A     178

         ..*.*...  * * *.  .  *     ****  . **  . *..*  * 
    131 GQSNMTMVN  V RAIVS FSGKPLVKNGETY LDVTD  LKITMKPES      172
    179 AEANVTLISPFVGR ILDWY  K  ASTGETYTAE TDPGV ISVK  SI     219

         ..*  * . *   .   * * *. *** * *  . .    *.*  .* *
    173  SHY  H FSN   L   F N GD KAL G DN MNV   FLNE  NS E     200
    220 YNYYKKHGY NTIVMGASFRNVGEIKALAGVD FLTISPKLLDELLSSDE     267

          * *   *.***   .* **     *  . *    .   *  .*. .  
    201   A IY KETAKA  IDR SF G   KL Y L   GV V KGVISK LPY     231
    268 PVAKILDPESAKAEGSERVSFINDEPKFRFELNEDAMATEK  LSEGI       313

         ** **
    232 AKFFAD     237
    314 RKFSAD     319

# End_N: 1
# End_Alignments_Rank: 17
# Start_Alignments_Rank: 18
# Query: query_seq Target: SWALL:PON1_MOUSE Number_of_Alignments: 1
# Target_Title: P52430 SERUM PARAOXONASE/ARYLESTERASE 1 (EC 3.1.1.2) (EC 3.1.8.1) (PON 1) (SERUM ARYLDIAKYLPHOSPHATA
# N: 1 Raw_Score: 406 Query_Length: 239 Target_Length: 354 ln()_Score: 378
        * *      *     .* * *  * . * *    * . * *  .. *  *
      2 L L     XS  X  DAKFPE DP K P C  XXG D G EXIMK LC N      30
     13 LALYKNHRSSYQTRLNA FREVTPVELPNCNLVKGIETGAED LEIL PN      59

          * **    .  *    *   **  * ** *   .*  *  . .*  * 
     31   TLFSENSAE  G    D   PG  LNLMQL   DPLKVDRM VISQG       62
     60 GLTFFS TGLKYPGIKSFDPSKPGKIL LMDLNKKEP AVSELEII  GN     104

          . ** .*  **. ***  ** .*    .   *    . .* * *    
     63   E SS SPV GITLTFT  DNLLYG   IK  D  QRIXKV KGF   G      94
    105 TLDISSFNP HGIS TFTDEDNTVY LLVVNHPDSSSTV EVFK FQEEE     149

        * *   * .* .* .   *       .**   *  *         * . *
     95 RXLTAKHEVKIVT KTFSP       VGP   Y  NIQGKVLIL P I S     128
    150 RSL L H LKTITHELL PSINDIAAIGPESFYATN D H YFADPYLRS     192

             *   **  .*    . *. .*.    * .*  . .  .*. *.  
    129      GTGQSNMTMV    N VRAIVS    F SGKPL VK NGETYLD      160
    193 WEMYLGLSWSN  VVYYSPDKVQ VVAEGFDFANG  IGISLDGK YV Y     235

        . .* .  *    * *  * .*        * *     *       **  
    161 VTDLKITMKPESSH Y  HFSN        L F     N       GDKA     186
    236 IAEL LAHK   IHVYEKH ANWTLTPLKVLNFDTLVDNISVDPVTGD       278

        *  *   * * .*     *    *     *  **      .* *  *  .
    187 L  G  DN MNVFL    N    E     N  SE     AIYKE  TA K     208
    279 LWVGCHPNGMRIFFYDAENPPGSEVLRIQNILSEDPKITVVYAENGTVLQ     328

           .  * . *** *  . * *  * * *     *
    209   AIDRS F GKLYLGVVKG VISK LPYAKFFAD     237
    329 GTTV ASVYKGKL L  I GTVFHKAL Y    CD     353

# End_N: 1
# End_Alignments_Rank: 18
# Start_Alignments_Rank: 19
# Query: query_seq Target: SWALL:YEIK_ECOLI Number_of_Alignments: 1
# Target_Title: P33022 HYPOTHETICAL 33.7 KD PROTEIN IN NFO-FRUA INTERGENIC REGION. 11/97                            
# N: 1 Raw_Score: 391 Query_Length: 239 Target_Length: 313 ln()_Score: 372
        .*   *   *  .*        * *    *  *  * . .  * **  . 
      2 LLXSXDAKFP  ED       PK PCXXGD  GEXI MKLC N TLFSEN      36
      7 IL   DCD PGHDDAIAIMMAAKHP AI DLLG  ITI VAGNQTL  DK      45

        .    . ***. * *. . *   * . *    *. .   .   ** ..  
     37 SAEG DPGLNLMQ LDPLKVDRMVISQGESSSPVGI  TLTFTDNLLY        80
     46 TL  IN GLNVCQKLE INVP  VYA G MPQPI MRQQIV ADN IHGE      84

         *. *       *  *   **  *.  * ** *. *        *  ***
     81  GIKDQRIXKVKG  FGRXLT  AK  HEVK IV T   K    TFSPVG     114
     85 TGL D       GPVF EPLTRQAESTHAVKYIIDTLMASDGDITLVPVG     125

        *  **      *     *.  ..* .  . ***  * *     *.     
    115 PY NI      Q G   KV  LILPI  S GTGQSNMT MV  NV    R     141
    126 PLSNIAVAMRMQPAILPKIREIVL MGGAYGTG  NFTPSAEFNIFADPE     172

         * .* * ** ***  * . *  .  * * *. *  * .   * .    *
    142  A IVSF SGKPLVKNG E TYLD  V T DLKIT M K   PESSHYHF     177
    173 AARVV FTSGVPLVMMGLDLT  NQTVCTPDV IARMERAGGP AGEL F     216

        *   *  *   * * *   *  *   *    . .* * .   . * .* *
    178 S   N  L   F N GDKAL  G   DNMN V FL N E  NS EAIYKE     205
    217 SDIMNFTLKTQFENYG   LAGGPVHD ATCIGYLINPDGIKTQE MYVE     261

            .*  * *  * *  *  . **. * * *  *     * .
    206 TAKAID RSFGKLYLG VV  K GVISKLPYA  KF FA D E     238
    262     VDVNS GPCY GRTVCDELGVLGK P ANTKVGITIDTD     296

# End_N: 1
# End_Alignments_Rank: 19
# Start_Alignments_Rank: 20
# Query: query_seq Target: SWALL:FIBP_ADE09 Number_of_Alignments: 1
# Target_Title: P36846 FIBER PROTEIN. 11/97                                                                         
# N: 1 Raw_Score: 408 Query_Length: 239 Target_Length: 362 ln()_Score: 379
        * *  . **  *     *   *     .*  . .*    *   . *  * 
      5 SXDA K FPEDP     K   PCXXG DGEXI MK    L C N T  LF      33
     34 SSDGFQNFP  PGVLSLKLADPIAI VNGN VSLKVGGGLTLQDGTGKL       78

        . * *  * *  *  * * . ** *  * * .. ...  *      *.*.
     34 SENSAEGD P GL  N L MQLD PLKV D RM VIS QG      ESSS      66
     79 TVN A  DPPLQLTNNKLGIALDAPFDVIDNKLTLLAGHGLSIITKETST     125

         * *.  *   **        ***    * .     . .* .  *  *  
     67  PVGI  T   LT   F    TDNLLY G IKDQR IXKV K  G  F        93
    126 LP GLRNTLVVLTGKGIGTESTDN   GGTV    CV RVGEGGGLSFNN     166

         *  * *  * *  *  . * *  *   * *  * *    *. *.*    
     94  GRXLTA  KHEV K IV TKTFSP VGPYN  I Q   GKV LILPISG     129
    167 DG DLVAFNKKE DKRTLWT T  PDTSP NCKIDQDKDSKLTLVL         206

        *  * *  .*... * *  .  *.. .  .* * * *  *   * *  . 
    130 T  G Q  SNMTM VNV  R AIVSFSG KP LVKNGE T  YL DVTDL     164
    207 TKCGSQILANVSLIV VDGKYKIIN NNTQPAL K G FTIKLLFD  E      248

          . *  ***.    * .* . * . .   .**.*     *.  *   . 
    165 K ITMKPESSH    Y HF S N LFN G DKALGDNMNVFLNENSEAI      202
    249 NGVLM  ESSNLGKSYWNFRNENSIMSTAYEKAIG     FM PN  LVA     288

        * * **   * *  *   .* .** *     * .*       *    .  
    203 Y KETA   K AIDRS  FGKLYL G     V VK       G    V       225
    289 YPKPTAGSKKYA  RDIVYGNIYLGGKPDQPVTIKTTFNQETGCEYSITF     336

          *  *  *     .   * *   * *
    226  IS  KLPY  A  K   F F   ADE     238
    337 DFSWAK TYVNVEFETTSFTFSYIAQE     362

# End_N: 1
# End_Alignments_Rank: 20
# Start_Alignments_Rank: 21
# Query: query_seq Target: SWALL:G436055 Number_of_Alignments: 1
# Target_Title: G436055 FIBER PROTEIN. 1/98                                                                         
# N: 1 Raw_Score: 408 Query_Length: 239 Target_Length: 362 ln()_Score: 379
        * *  . **  *     *   *     .*  . .*    *   . *  * 
      5 SXDA K FPEDP     K   PCXXG DGEXI MK    L C N T  LF      33
     34 SSDGFQNFP  PGVLSLKLADPIAI VNGN VSLKVGGGLTLQDGTGKL       78

        . * *  * *  *  * * . ** *  * * .. ...  *      *.*.
     34 SENSAEGD P GL  N L MQLD PLKV D RM VIS QG      ESSS      66
     79 TVN A  DPPLQLTNNKLGIALDAPFDVIDNKLTLLAGHGLSIITKETST     125

         * *.  *   **        ***    * .     . .* .  *  *  
     67  PVGI  T   LT   F    TDNLLY G IKDQR IXKV K  G  F        93
    126 LP GLRNTLVVLTGKGIGTESTDN   GGTV    CV RVGEGGGLSFNN     166

         *  * *  * *  *  . * *  *   * *  * *    *. *.*    
     94  GRXLTA  KHEV K IV TKTFSP VGPYN  I Q   GKV LILPISG     129
    167 DG DLVAFNKKE DKRTLWT T  PDTSP NCKIDQDKDSKLTLVL         206

        *  * *  .*... * *  .  *.. .  .* * * *  *   * *  . 
    130 T  G Q  SNMTM VNV  R AIVSFSG KP LVKNGE T  YL DVTDL     164
    207 TKCGSQILANVSLIV VDGKYKIIN NNTQPAL K G FTIKLLFD  E      248

          . *  ***.    * .* . * . .   .**.*     *.  *   . 
    165 K ITMKPESSH    Y HF S N LFN G DKALGDNMNVFLNENSEAI      202
    249 NGVLM  ESSNLGKSYWNFRNENSIMSTAYEKAIG     FM PN  LVA     288

        * * **   * *  *   .* .** *     * .*       *    .  
    203 Y KETA   K AIDRS  FGKLYL G     V VK       G    V       225
    289 YPKPTAGSKKYA  RDIVYGNIYLGGKPDQPVTIKTTFNQETGCEYSITF     336

          *  *  *     .   * *   * *
    226  IS  KLPY  A  K   F F   ADE     238
    337 DFSWAK TYVNVEFETTSFTFSYIAQE     362

# End_N: 1
# End_Alignments_Rank: 21
# Start_Alignments_Rank: 22
# Query: query_seq Target: SWALL:G2384851 Number_of_Alignments: 1
# Target_Title: G2384851 R11G11.1 PROTEIN. 1/98                                                                     
# N: 1 Raw_Score: 420 Query_Length: 239 Target_Length: 400 ln()_Score: 383
        *   *  *  *      *   . .  **  *  *.*.    *   *  * 
      1 CLLXSXDAK F      P   E D PKP  CXXGDGEXI MK   L  C       29
     28 C   S  A FFRRTATVPKWHQKNCQKPSKCKNGEGQ YHCKPCRLKRCI      70

            **   **   . * ** . .*  * * *     * *   *.  . *
     30     NTLFSEN SAEGDPGLNLMQL DP L K     VDR  MVI  SQG      62
     71 AVGMNT   ENFQFDRD GL VAKLKKPKLPKSFEMFVGRPEYVLFCTPG     115

         *   *.*     * *. .     * ** *     * .** . *  . **
     63 ES   SSP     V GITLTF TDN LLYG     I KDQRIXK  VKGF      93
    116 TSAQISNPKTLIDVSGL VN KASNVLLTGPEIPIIARDQ LHKLAI GF     161

           *  *.   *   *   * * **     .*  .  *    *  .  . 
     94 GRXL  TA   K   H   E V KI     VT  K  T    FSPVGPYN     117
    162 S FLENTSTNMKDFPHSSKEDVLKIWEFYFLTVARWLTYFDEFQKL DHK     209

        **           *. *  .*   *.   *   * . * .*. * *    
    118 IQ           GKVL  IL  PIS   G   TGQSN MTMVN V         140
    210 IQMTLLLAIWHVWGR LDKLLATAINRRRGLCPT K NLLTLSNGVFIDM     256

          . . * . .  .*   *  . .*    * *  .. * * . ..*   *
    141   RAI VSF SG KP   L  VKNG    E TYLDVTD LKITMKP   E     171
    257 EHQEVDVDWMTNYEPEQVLTFI DGVRARELT KEI DPL VELEPSDIE     302

        *. *  . * *.  * *  * *      *.. .* * .*  *  *. *  
    172 SSHYHFSNL FN  GDK  ALG      DNM NVFLNEN SEAIYK ETA     207
    303 SA YMLAQLCFHYAG KRFA GEIQEICDHLQDV LAQNLHE YYQNE       345

        * *** * *   **  . * * *  *    **.  .* * *    * *
    208 KAIDR SFG   KLY L GVV KGVI    SKLPYAKFFAD    E S     239
    346 KKIDRYS GRLAKLIKINGAVQKN IWENRSKIKISKTF DMLSIETS     390

# End_N: 1
# End_Alignments_Rank: 22
# Start_Alignments_Rank: 23
# Query: query_seq Target: SWALL:G2688719 Number_of_Alignments: 1
# Target_Title: G2688719 GTP-BINDING PROTEIN (OBG). 2/98                                                            
# N: 1 Raw_Score: 396 Query_Length: 239 Target_Length: 328 ln()_Score: 374
        * . *   . **  . *  *   *. *     * *.   *  ** * .* 
      1 CLLXS  XDAKFPEDPK  PCXXGD GE  X IMKLC  N  TL FSENS      37
     21 C V SFLRE KF  NAKGGP DGGNGGSGGSVIFKV RENLSTLSFYKNG      63

            ** * **   *     *  *   * *  ..  *  .** *    * 
     38     AE GDPGLNLMQLDPLKVDRMVISQGESSSPVG  ITLTF    T       75
     64 HVLCAENGKPG   M  G FK  R   S G  AN  GKDLTL FVPPNTE      96

           .*   *** .*   *.  .  * ** **  *     *  *.  * . 
     76    DN   LLYGIK   DQR IXKV KGFGR XL   TAKHEVKI VTKT     109
     97 VYNENDGTLLYRLKNLNDE FV  VLKG GRGGLGNWNFKTSVR RVPR      140

        *. * *   *   .  .      . *. ** .  *.*.. . * *   * 
    110 FS PVGPY N   I  Q    GKV LI LPISGTGQSNMTMVNVR   A      142
    141 FAQP GESGNSLSVRLELFLVADIGLVGLP N AGKSSL L N RITSAK     184

          . .  *. * * *   *    .* *  **  *  . *   . .*   *
    143   IVS  FSGK P LVKNG   ETYLDVTDLK IT MKP   E SSHYHF     177
    185 SRVANYPFTTKIPHL   GMLRRSY D  DL IIADI PGIIKGAS   F     223

           *   *  .    *  **   *    * .   *. ***  . *  .. 
    178 S NL   F  N G DK  ALG  D    N M   NVFLNE  N SEAIY      203
    224 GVGLGTKFLKHIAKTKILAL VIDISEANFLESYNILLNELKSYSHKLFN     272

         *.   * *  .*   ..*    *  **   ** * ** . *        
    204  KE  TA KA ID   RSFG   KLYLG   VVKGVISKLPY   A         232
    273 KKKIIIANKLDLDGSEKNFDCLIKA LGKEKVV G IS I YENRGIDEL     317

         * **  * ..
    233  K FF  ADES     239
    318 IKEFFILA KT     327

# End_N: 1
# End_Alignments_Rank: 23
# Start_Alignments_Rank: 24
# Query: query_seq Target: SWALL:D1023424 Number_of_Alignments: 0
# Target_Title: D1023424 MURD (FRAGMENT). 1/98                                                                      
# End_Alignments_Rank: 24
# Start_Alignments_Rank: 25
# Query: query_seq Target: SWALL:RS4E_YEAST Number_of_Alignments: 0
# Target_Title: P05753 40S RIBOSOMAL PROTEIN S4 (S7) (YS6) (RP5). 10/96                                             
# End_Alignments_Rank: 25
# Start_Alignments_Rank: 26
# Query: query_seq Target: SWALL:E1227153 Number_of_Alignments: 1
# Target_Title: E1227153 FIBER PROTEIN. 2/98                                                                        
# N: 1 Raw_Score: 408 Query_Length: 239 Target_Length: 366 ln()_Score: 378
        * *  * **  *     *   *    .*. . .*    *  **  .   *
      5 SXDA K FPEDP     K   PCXXGDGEXI MK    LCNTLFSENSAE      39
     34 SSDGFKNFP  PGVLSLKLADPITIANGD VSLKVGGGL  TL  Q   E      73

        *    **     *  *  * .*   ** .*  ... . .  *     . *
     40 G    DP G   L  N  LMQL   DPLKV  DRM V ISQG     E S      64
     74 GSLTVDPKAPLQLANNKKL ELVYVDPFEVSANKLSLKVGHGLKILDDKS     122

        .      .*  . **     *.* *    *   * *   *  . *  *  
     65 S   SP VG  ITLT   F TDNLLYGIKD  QR I XKV  K G  F        93
    123 AGGLKDLIGKLVVLTGKGIGTEN LQN TDGSSRGIGISVRAREGLTFDN     170

         *  * *   *..    *.* . .*   * *  *  .   *. *.*    
     94  GRXLTA   KHEVKIVTKT F SP VGPYN  I  Q  GKV LILPISG     129
    171 DG YLVAWNPKYD    TRTLWTTPDTSP NCRIDKEKDSKLTLVL         210

        *  * * . . ** . **  ***      . *.*  *.  *   **  . 
    130 T  GQSNMTMVNVRA IVSFSGKPLVKNGETYLD VTD  L   KI TM      168
    211 TKCG SQI LANV SLIV VSGK  Y   Q YIDHATNPTLKSFKIKLLF     250

          *    * **.    * .* * **    . *     * * *.  *   .
    169   K    PESSH    Y HF S NLFN GDKALGDNMN V FLNENSEAI     202
    251 DNKGVLLP SSNLDSTYWNFRSDNL TVSE AY  K NAVEFM PN  LV     291

         * *  * . * *  *   .* .***   * .. . *   *  *   ** 
    203  Y K ET A K AIDRS  FGKLYLGVVKGVIS KLPYA KF F   ADE     238
    292 AYPKPTTGSKKYA  RDIVYGNIYLG   G LAYQ PVVIKVTFNEEAD      333

        *
    239 S     239
    334 S     334

# End_N: 1
# End_Alignments_Rank: 26
# Start_Alignments_Rank: 27
# Query: query_seq Target: SWALL:E80999 Number_of_Alignments: 0
# Target_Title: E80999 CAP1 PROTEIN. 1/98                                                                           
# End_Alignments_Rank: 27
# Start_Alignments_Rank: 28
# Query: query_seq Target: SWALL:CAPA_YEAST Number_of_Alignments: 0
# Target_Title: P28495 F-ACTIN CAPPING PROTEIN ALPHA SUBUNIT. 6/94                                                  
# End_Alignments_Rank: 28
# Start_Alignments_Rank: 29
# Query: query_seq Target: SWALL:YJIA_ECOLI Number_of_Alignments: 0
# Target_Title: P24203 HYPOTHETICAL 32.0 KD PROTEIN IN MRR-TSR INTERGENIC REGION (F284). 11/97                      
# End_Alignments_Rank: 29
# Start_Alignments_Rank: 30
# Query: query_seq Target: SWALL:Q42546 Number_of_Alignments: 1
# Target_Title: Q42546 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (EC 3.1.3.7) (PHOSPHOADENYLATE 3'-NUCLEOTIDASE) (3'-PHOSP
# N: 1 Raw_Score: 403 Query_Length: 239 Target_Length: 353 ln()_Score: 376
        *      ** * *  .*   * * *    * * . .. *     * **  
      1 C      LLXSXD  AKFPEDPK PCXXGD G EXIMKL C NTLFSEN       36
     21 CQKVQKALLQS DVQSK  SD KSPVTVADYGSQAVVSLVLEKELSSEPF      66

        *  * *  **    * .  * * * .. ..*   . .. ** .  * **.
     37 S  A E  GD   PGLNLMQLDPL KVDRMV   I SQGESSSPVGITLT      73
     67 SLVAEEDSGDLRKDG S  Q DTLERITKLVNDTLATE ESFN  GSTLS     109

         **.**  * *       .* *      .*  * .  .  ** *  . * 
     74 FTDNLLYGIKDQRI XKVKGFGRXL TAKHE VKI  V  TKTFSPV G      114
    110  TDDLLRAI D  CGTS EG G   PNGRH WV LDPIDGTKGF  LRGD     146

         *      . .** ** .     **. *   * .*    * ..  * *  
    115 PY    N I QGK VL I     LPI SG TGQSNMTMVNVRAIVSFS       147
    147 QYAVALGLLEEGKVVLGVLACPNLPLAS IAG NN  K N KS  S SDE     187

         *   *    . .* **   **  .  .*  . ... * * *   *    
    148  GKP L    VKNGETY   LD VTD LK  I TMK P E S   S         173
    188 IG  CLFFATIGSG TYMQLLDSKSSPVKVQVSSVENPEEASFFESFEGA     234

        *  *   *.. *  *        *   *  **  **   ..*   .    
    174 H YH F SNLFN  G        D   K  AL  GDNMNVFL   N         196
    235 HSLHDLSSSIANKLGVKAPPVRIDSQAKYGALSRGDGA IYLRFPHKGYR     283

        *    . . **   *     *  * * .*  *  ** *  *  *..  * 
    197 E    N SEAI YKE     T  A KAIDRSF  GKLY  L  GVVKGVI     226
    284 EKIWDHVAGAIVVTEAGGIVTDAAGKPLD  FSKGK YLDLDTGII  VA     328

        . ** *   *  *  * *
    227 S KL P YAKFFA  DES     239
    329 NEKLMPLLLK  AVRD S     343

# End_N: 1
# End_Alignments_Rank: 30
# Start_Alignments_Rank: 31
# Query: query_seq Target: SWALL:FIBP_ADE08 Number_of_Alignments: 1
# Target_Title: P36845 FIBER PROTEIN. 11/97                                                                         
# N: 1 Raw_Score: 405 Query_Length: 239 Target_Length: 362 ln()_Score: 376
        * . *  *    *      .. *    *     *  .   *  . .** .
      3 LXSXDAKF    P      ED P   KP CXX G  D   GEXI MKLCN      30
      5 LRAED DFNPVYPYGYARNQNIPFLTPPFVSSNGFQNFPPG VLSLKLAD      52

          *.  ..* *           * *      . *  *  * * . ** * 
     31   TLF SEN S       A   E G      D P GL  N L MQLD PL      52
     53 PITI NNQNVSLKVGGGLTLQEETGKLTVNTEPPLHLTNNKLGIALDAPF     101

         * * .. ...  *      *.*. * * . *   **     **  *   
     53 KV D RM VIS QG      ESSS PVG I T   LT   F TD  NLLY      80
    102 DVIDNKLTLLAGHGLSIITKETSTLP GLVNTLVVLTGKGIGTDLSN  N     148

         * *     . .* .  *  *   *  * *  * *  *  . * *  *  
     81  G IKDQR IXKV K  G  F   GRXLTA  KHEV K IV TKTFSP V     113
    149 GGNI    CV RVGEGGGLSFNDNG DLVAFNKKE DKRTLWT T  PDT     188

         * *  * *    *. *.*    *  * *  .*... * *  *  *.. .
    114 GPYN  I Q   GKV LILPISGT  G Q  SNMTM VNV  R AIVSFS     147
    189 SP NCRIDQDKDSKLSLVL    TKCGSQILANVSLIV VAGRYKIIN N     231

           * * * *  *  * . * *  . *  ***.    * .* . * . . 
    148 G KP LVKNGE TY LDVTDLK  ITMKPESSH    Y HF S N LFN      182
    232 NTNPAL K G FTIKL LFD KNGVLM  ESSNLGKSYWNFRNQNSIMST     274

          .**.*     *.  *   . * *  * . * *  *   .* .** *  
    183 G DKALGDNMNVFLNENSEAI Y K ET A K AIDRS  FGKLYL G       220
    275 AYEKAIG     FM PN  LVAYPKPTTGSKKYA  RDIVYGNIYLGGKP     314

           * .*       *    .    *  *  *     .   * *   * *
    221    V VK       G    V   IS  KLPY  A  K   F F   ADE     238
    315 HQPVTIKTTFNQETGCEYSITFDFSWAK TYVNVEFETTSFTFSYIAQE     362

# End_N: 1
# End_Alignments_Rank: 31
# Start_Alignments_Rank: 32
# Query: query_seq Target: SWALL:G2460188 Number_of_Alignments: 1
# Target_Title: G2460188 POLYGALACTURONASE INHIBITING PROTEIN. 1/98                                                 
# N: 1 Raw_Score: 394 Query_Length: 239 Target_Length: 330 ln()_Score: 372
        * **     *         . **  * ***   * *  *   .*    . 
      7 DAKFPEDPKPCXXGDGEXIMKLCN T LFSE  NSA  EG  DP G  LN      45
      2 DVKF     P       T L LC LTLLFSTILNPALSE LCNPEDKKV       34

        *.*.     **  *   *          *  *    *   . * . *. *
     46 LMQL     DP  L   K          V  D    R   MVI SQGE S      64
     35 LLQIKKAFNDPYVLTSWKPETDCCDWYCVTCDSTTNRINSLTIFA GQVS      83

           *  **    . ** *    **  * *  *  * *.*     *  * *
     65 SS P  VG    I TLTF TD NLLYG IKDQ RIXKVKGFGRXLTAKHE     102
     84 GQIPTQVGDLPYLETLEFHKQPNLT GPI  QPSIAKLK L   L  K E     123

        ... .  * . . *  * . . *  *  *  . *  *  ** *  . .. 
    103 VKIVTK TFSPV G  P YNI QG KV L  I LPISG TGQS  N MTM     137
    124 LRL S WT N ISGSVPDF LSQ LK NLTFLDLSFSNLTG SIPSWLSQ     165

        . *. *. *  .  .*  *  *. ** . *  * *  *   ..  *. * 
    138 V NVRAI V  S FSGK PLVKN GETYLD  VTD  L   KI  TMKPE     171
    166 LPNLNALRVDRNKLTGHIP  KSFGE F DGSVPDLYLSHNQLSGTI PT     210

        * .  .** . *  *  * * ** .*    *    .  *  *  * * * 
    172 S SHYHFSNL F  NGDKAL GD NM    N    VF L  N  E N SE     200
    211 SLAKLNFSTIDFSRN  K LEGDASMIFGLNKTTQIVDLSRNLLEINLSN     257

         . . *  *  ..* .  *.   *. * *   *      .*  .*    *
    201 AI Y KE TAKAIDRSFGKLYL GV VKG   V      IS  KL    P     230
    258  VEFSKSLT  SLDLNHNKI TGGIPV GLTQVDLQFLNVSYNRLCGQIP     302

           *   * * *
    231 Y AKF  FADES     239
    303 VGGKLQSF DSS     313

# End_N: 1
# End_Alignments_Rank: 32
# Start_Alignments_Rank: 33
# Query: query_seq Target: SWALL:P72968 Number_of_Alignments: 0
# Target_Title: P72968 HYPOTHETICAL 32.6 KD PROTEIN. 2/97                                                           
# End_Alignments_Rank: 33
# Start_Alignments_Rank: 34
# Query: query_seq Target: SWALL:DHD2_LACCA Number_of_Alignments: 1
# Target_Title: P17584 D-2-HYDROXYISOCAPROATE DEHYDROGENASE (EC 1.1.1.-) (D-HICDH). 11/97                           
# N: 1 Raw_Score: 395 Query_Length: 239 Target_Length: 333 ln()_Score: 372
        ..   .  *  . * .   *     * *   ..  .*  *  **.   *.
      2 LLX  S XD AK FPED PKPCXXGD GEXIMKLCNTL F SENS   AE      39
      3 IIAYGARVDEIQYF KQWAK     DTGNT LEY HT EFLDENTVEWAK      43

        * * *.* * *  *             .*      *  *   *  . * *
     40 G DPGLN LMQLDP             LK      V  DR  M VISQ G      62
     44 GFD GINSL QTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYG      91

           *   . **  *   *  **  **     * *  * .. .     * *
     63  E S   S SPVGITLTF  TDNLLY     GIKD Q RIXKV    K G      92
     92 IRLSNVPAYSPAAIA EFALTDT LYLLRNMG K VQAQL QAGDYEKAG     136

         * *. *   *       *  .*  *.      *   .   *. *  *  
     93  F GRXL   T    AK H  EV  KI   V TK  TFS  PV G  P       115
    137 TFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDF     186

         * ...   *   * * *  * *   *    . . * *    .* *  * 
    116  Y NIQG  K   VLI L  P I SGT   GQ S N M   TMV N VR      141
    187 DYVSLEDLFKQSDV IDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARP     235

              *..*   *** *  *  * .** .  * ** . . *    *   
    142       AIVS F SGKPL  VKNG ETYLDV T DLKITM KPESSHY H     176
    236 NLIDTQAMLSNLKSGK LAGV  GIDTY EYETEDL LNLAK    H GS     275

        * . *.  *. **  * ** *   *   * * **  *.  .   *  * .
    177 FSN LFNGDKALGDNM NVFLNENS E AIYKETAKAIDRS   FGKL Y     218
    276 FKDPLW  DELLG  MPNVVL   SPHIAYYTET  AV HNMVYF SLQH     314

        * *  . **   * ..  * **
    219 LGV  V KG VIS KL  PYAK     233
    315 L VDFLTKGET STEVTGP AK     333

# End_N: 1
# End_Alignments_Rank: 34
# Start_Alignments_Rank: 35
# Query: query_seq Target: SWALL:O07524 Number_of_Alignments: 0
# Target_Title: O07524 HYPOTHETICAL 33.8 KD PROTEIN. 1/98                                                           
# End_Alignments_Rank: 35
# Start_Alignments_Rank: 36
# Query: query_seq Target: SWALL:KRB2_VACCV Number_of_Alignments: 0
# Target_Title: P24362 POSSIBLE PROTEIN KINASE B12 (EC 2.7.1.-). 11/95                                              
# End_Alignments_Rank: 36
# Start_Alignments_Rank: 37
# Query: query_seq Target: SWALL:DHG_THEAC Number_of_Alignments: 1
# Target_Title: P13203 GLUCOSE 1-DEHYDROGENASE (EC 1.1.1.47). 11/95                                                 
# N: 1 Raw_Score: 401 Query_Length: 239 Target_Length: 352 ln()_Score: 374
        .. . **     *.       **  * *  *     *  * * ** .   
      2 LLXSXDA     KF       PE  DPK  P     CXXG D GEXIM K      27
      6 IV T DAPKGGVKYTTIDMPEPEHYDAKLSPVYIGIC  GTDRGE VAGA      50

        * . * ..   **       *     .  * * .   .*. . **     
     28 LCN TLFS   EN      SA     EG DPG L   NLMQLDPL           52
     51 L SFT YNPEGENFLVLGHEALLRVDDARDNGYIKKGDLV V PLVRRPG      96

        * .. *  *  * .. *   *     *** *  *  * ..*   * . . 
     53 K VD RMVIS QGES S  SP    VGIT L TF TDNLLYGIKD QRIX      88
     97 KCINCR  IGRQ DNCSIGDPDKHEAGITGLHGFMRD VIY  DDIEYLV     140

        **.    **   **   *.     **  .*.* . *   *   .  * **
     89 KVKG  FGR X LT  AKH     EV KIVTK T FSPVGPY N  IQGK     121
    141 KVEDPELGRIAVLTEPLKNVMKAFEVFDVVSKRSIF  FGD DSTLI GK     186

          ... * **      .  *  .  ..**** *         *.  * * 
    122 V LILPI SG      T  G  QS NMTMVNVR   A     IV SFSGK     149
    187  RMVI IGSGSEAFLYSFAGVDRGFDVTMVN RHDETENKLKIMDEF G      231

          **  *   ** *    . ** . *   * .. . *     .*    **
    150 PLVK  NGETYL D    VTDLKI TM KPESSHYHF     SN    LF     181
    232   VKFAN   YLKDMPEKI DLLVDTSGDPTTT FKFLRKVNNNGVVILF     274

          ** **  *   *  .. ..  * *     * . * * * . * ...  
    182   NGDKAL G   DNMNV FLN E N     S E A I YKETA KAIDR     212
    275 GTNG KA PGYPVDGEDIDYI VERNITIAGSVDAAKIHYVQ ALQSL       318

        * . . .    .* .*    *  * * * ..   .  *
    213 S FGKLYL GVVKGVI    S  KLP Y AKFFAD  E     238
    319 SNWNRRH PDAMKSIITYERSRPK PTYSSR   NHTE     351

# End_N: 1
# End_Alignments_Rank: 37
# Start_Alignments_Rank: 38
# Query: query_seq Target: SWALL:HIS4_LACLA Number_of_Alignments: 0
# Target_Title: Q02131 PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE RIBOTIDE ISOMERASE (EC 5.3.1.16). 7/93  
# End_Alignments_Rank: 38
# Start_Alignments_Rank: 39
# Query: query_seq Target: SWALL:G2565146 Number_of_Alignments: 0
# Target_Title: G2565146 HISA. 1/98                                                                                 
# End_Alignments_Rank: 39
# Start_Alignments_Rank: 40
# Query: query_seq Target: SWALL:Q24867 Number_of_Alignments: 1
# Target_Title: Q24867 ELONGATION FACTOR-1 ALPHA (FRAGMENT). 1/98                                                   
# N: 1 Raw_Score: 419 Query_Length: 239 Target_Length: 410 ln()_Score: 381
        *     *     ** *  *     * *  .   .. **        *   
      1 CLLXSXD  A  KFPEDPKPC XXGDG  E X IM KL C    N T         31
      8 C  GGIDKRTIEKF E  KEAQEMGKGSFKYAWVLDKLKAERERGITIDI      52

         *  * .*  *     * **    . *..    * *   *  ... *  *
     32  L  F SEN SAEG  D PG    L NLM    QLDPLKVDRMVI SQ G      62
     53 ALWKFTTEKYSVT IIDAPGHRDFIKNMITGTSQAD CAV  LIVASSTG      98

        *  .  **.     * .. ** *  *.* * *  * *  . .  *     
     63 ESSSPVGITLTF  T DN LL Y  GIKDQRIXKVKGFGRXL  T           98
     99 EFEA  GISKN GQTREHALLAYTLGVK QMI  V GVNK IDNTEPPYS     140

         *  * *. * *   * *    ** **   * * *.****  *  **   
     99  A  KHEV K I   VTKTFSPVGPYNIQGK VLILPISG TGQSNM        135
    141 EARFK EISKEISAYV K  K VG YN P KEVAIVPISGWHG DNMIEP     181

         * *       . *               *.*  .   . *    **  *
    136  T M  V   NV R               AIV  SF  SGK    PL  V     152
    182 STNMSWYKGWEIERKAGKASGKTLLEALDAVVPPT RPTEKPLRLPLQDV     230

         *  *  *  .  . *  **    .*  *     *  *   * * *    
    153  K NG ETY LD V TD LK    ITMKP     E  S S HYHFS         178
    231 YKIGGIGTVPVGRIETGILKPAMVVTFAPANITTEVKSVEMH HTSLTEA     279

            *. *   *    * *  *    *. *        *      ** . 
    179     NL F   N G  D KALG    DNMN     V  F      LNEN      198
    280 LPGDNVGFNVKNVSVKDIKR GMVCSDSKNDPAKETKSFVAQVIVLN HP     327

         * *   *.   .  *   * * *     ** ** **. *     .** *
    199 SEAI   YK   E  T   A K A     ID RSFGKLYL  G  VVK G     224
    328 GE IHSGYQPVLDCHTAHIACKFAVLQQKIDRRS GKV LEENPKMVKSG     374

            .  . ** .   *   **   . **  * *
    225     V  I SK L   P   YA   KFFA  DES     239
    375 DAAMIELVPSKPMVVEPYGDYAPLGR FAVRDMS     407

# End_N: 1
# End_Alignments_Rank: 40
# Start_Alignments_Rank: 41
# Query: query_seq Target: SWALL:YOF9_CAEEL Number_of_Alignments: 0
# Target_Title: Q09336 HYPOTHETICAL 27.2 KD PROTEIN ZK1290.9 IN CHROMOSOME II. 11/97                                
# End_Alignments_Rank: 41
# Start_Alignments_Rank: 42
# Query: query_seq Target: SWALL:E285201 Number_of_Alignments: 1
# Target_Title: E285201 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE (EC 3.1.3.7). 2/98                                      
# N: 1 Raw_Score: 399 Query_Length: 239 Target_Length: 347 ln()_Score: 373
        ** *    *   * . *    * * . .. *   *   *   .  *  * 
      2 LLXSXDA KFPEDPK PCXXGD G EXIMKLCNTLFS E   N  S  A       38
     28 LLQS QVWK KSD RSPVTAADYGSQAVVSL  VL ERELQPDKLSLVAE      71

         * **  *  *   .  * * . * * * .  *. **  ***    *. *
     39  E GDPGL  NL MQ  L DPL K V DRMVISQGES  SSPVGITLTFT      75
     72 EETGD  LRKN GSEAFLED IAKLVKDTLA SE ESYTSSP    LS T     110

        *..*  * *    * .* *     *  *  * .  .  *. *  * *  *
     76 DNLLYGIKDQRIXKVKGFGRXLTAK  HE VKI  V  TKTFSPV G PY     116
    111 DDVLNAI D  CGKSEG G    CKGSH WV LDPIDGTRGF  VRGEQY     148

               ..** ** .     **. *    *   * .   *  .   *  
    117   N    IQGK VL I     LPI S   GTGQSNMTM  VN VR  AIV     144
    149 AVGLALLVEGKVVLGVMACPNLPLASAVCAT  DNSSQEDVGCL FFATT     195

         *  .  *  *   *  . *  * *  **  . *  .  ** *     * 
    145  S  F  S  G K P  L V KNGETYLDVTDLKITMKPESSH    YH      176
    196 GSGTYVQSLKGNSLPQKVQVSSN EN LD  EAKF L  ESYHKPIPIHG     238

          .  *  *        *   *  **  **  . . * **   *    . 
    177  FS NLFNG        D   K  AL  GD NMNV F LN   E    N      198
    239 TIAKKL  GIKALPVRIDSQAKYAALSRGDAEIYLRFTLNGYRECIWDHA     286

          *    **  .   . * *..*  *  ** **    * *.*  . ** *
    199   S    EA  IYK E TAKAIDRSF  GKLYLGVV K GVI  S KL P     230
    287 PGSIITTEAGGVV CDATGKSLD  FSKGK YL  AHKTGIIVTTKKLKP     330

        .  *  *  **
    231 Y AKFFA DES     239
    331 WILK  AVRES     339

# End_N: 1
# End_Alignments_Rank: 42
# Start_Alignments_Rank: 43
# Query: query_seq Target: SWALL:G2690194 Number_of_Alignments: 0
# Target_Title: G2690194 HYPOTHETICAL 28.1 KD PROTEIN. 2/98                                                         
# End_Alignments_Rank: 43
# Start_Alignments_Rank: 44
# Query: query_seq Target: SWALL:Q53085 Number_of_Alignments: 0
# Target_Title: Q53085 NODO. 11/96                                                                                  
# End_Alignments_Rank: 44
# Start_Alignments_Rank: 45
# Query: query_seq Target: SWALL:YG4F_YEAST Number_of_Alignments: 0
# Target_Title: P42938 HYPOTHETICAL 33.3 KD PROTEIN IN ADE3-SER2 INTERGENIC REGION. 10/96                           
# End_Alignments_Rank: 45
# Start_Alignments_Rank: 46
# Query: query_seq Target: SWALL:FIBP_ADE03 Number_of_Alignments: 0
# Target_Title: P04501 FIBER PROTEIN. 11/97                                                                         
# End_Alignments_Rank: 46
# Start_Alignments_Rank: 47
# Query: query_seq Target: SWALL:PON1_HUMAN Number_of_Alignments: 1
# Target_Title: P27169 SERUM PARAOXONASE/ARYLESTERASE 1 (EC 3.1.1.2) (EC 3.1.8.1) (PON 1) (SERUM ARYLDIAKYLPHOSPHATA
# N: 1 Raw_Score: 401 Query_Length: 239 Target_Length: 354 ln()_Score: 374
        * *      *     .* .  *  * . * *    * . * *  *. *  
      2 L L     XS  X  DA KFPE DP K P C  XXG D G EXIMK LC       29
     13 LALFRNHQSSYQTRLNALR  EVQPVELPNCNLVKGIETGSED MEIL P      58

        * * * *  *  .  *      . **  * ** *   **  * . .  *.
     30 NTL F SENSA E  G      D PG  LNLMQL   DPLKV DRMV IS      60
     59 NGLAFIS  SGLKYPGIKSFNPNSPGKIL LMDLNEEDP TVLE L GIT     102

         *   . ** .*  **. ***  ** .*    .   * .  . .. * * 
     61 QG   E SS SPV GITLTFT  DNLLYG   IK  DQR  IXKV KGFG      94
    103  GSKFDVSSFNP HGIS TFTDEDNAMY LLVVNHPDAKSTV ELFK F      145

        .    *   * .* .  *   *       ***   *  *       * * 
     95 RXLTAK   HEVKIVT KTFSP       VGP   Y  NIQGKVLIL P      126
    146 QE EEKSLLH LKTIRHKLL PNLNDIVAVGPEHFYGTN D H YFLDPY     189

        .    **  *      . .*    . ** .*.    * .*  . .  .*.
    127 ISGTGQS NM      T MV    N VRAIVS    F SGKPL VK NGE     156
    190 L    QSWEMYLGLAWSYVVYYSPSEVR VVAEGFDFANG  INISPDGK     232

         *.  . . *  **         *. * . *   * * *  *       *
    157 TYLD VTD L  KI         TMKP ESSHYHFSN LF N       G     183
    233  YV YIAELLAHKIHVYEKHANWTLTPLK S LDF NTLVDNISVDPETG     277

        *  *  *   * * .*   .**   ** . . .   *   * . . .   
    184 DKAL  G  DN MNVFL  NEN   SEAIYK E   T  AKAIDRSF        214
    278 D  LWVGCHPNGMKIFFYDSENPPASE VLRIQNILTEEPK VTQVYAEN     323

        * . * *  *  * **  .* .   * * * .
    215 GKLYL G  V  V KG  VI S   K LPYAK     233
    324 GTV LQGSTVASVYKGKLLIGTVFHKAL YCE     353

# End_N: 1
# End_Alignments_Rank: 47
# Start_Alignments_Rank: 48
# Query: query_seq Target: SWALL:Q96472 Number_of_Alignments: 1
# Target_Title: Q96472 FLAVANONE 3-HYDROXYLASE. 7/97                                                                
# N: 1 Raw_Score: 405 Query_Length: 239 Target_Length: 367 ln()_Score: 375
        *  * . . * .  *   **  **          *     *  *  *   
      2 L  LXSXD A K  F  PED  PK          P CX XG  D  G         22
      7 LTAL AGETALRSSFVRDEDERPKVGYNEFSDEIPVISLKGIDDVLGRRV      55

            * *.* * .  .* .   . * * ** .  * .*  *     *   
     23     EXIMKLC N TLFSENSAE G DPGLNL  M QL  D     P         51
     56 QIRKE IVKACEDWGIF Q VVDHGVDAGL IGEMTRLSKDFFSLPPEEK     101

        *. * *  * *.     * * .. . . * *  .** * *       *. 
     52 LKVDRMVISQGESSSPVG ITLTFTDNLLYG  IKDQR I X  K  VKG      92
    102 LRFD M  SGGK KG  GFI VS S H LQGEAVKDWREIVTYFSYPVRA     141

          . *    * * .. ** * .*  .   ..   *.* .*  *   * . 
     93   FGRXLTAKHE VKIVT KTFS PVGPYNIQG KVL ILPIS GTG QS     133
    142 RDYSR WPDKPEGLRAVTEK YSEKL  MDL ACKLLEVL  SEAMGLEK     184

          .*   * .  . .*.*   *   *   * .*   . *  *  * * * 
    134 N MT  MVNV  RAIVSF SGK   P   L VK   N GE T YL D V      161
    185 EALTKACVEMDQKLVVNFYP KCPQPDLTLGLKRHTDPGTITLLLQDQVG     233

            * *   *  **..* . .   .   *  ** **  * * * .* . 
    162     T DL  K  ITMKP E S   S   HY HF SN LF NGD KA L      187
    234 GLQATKD GGKTWITVQPVDGAFVVNLGDH GHFLSNGRFKNADHQAVVN     281

         . . *..  *  .* . ** .*  *  *   *** .   .* ..*    
    188 GD N MNV  FLNEN S EA IY  K  ETA KAI DR  SFGKLYLGVV     222
    282 SEHSRMSIATF  QNPAPEAKVYPLKVRE GEKAILEEPITFAEMY         324

          *  .** *  *  *  ** *
    223   KGVISK LPYA  KF FADE     238
    325 RRK  MSKDLELARIK KFAKE     343

# End_N: 1
# End_Alignments_Rank: 48
# Start_Alignments_Rank: 49
# Query: query_seq Target: SWALL:G2649636 Number_of_Alignments: 1
# Target_Title: G2649636 BRANCHED-CHAIN AMINO ACID ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN (BRAC-3). 2/98      
# N: 1 Raw_Score: 412 Query_Length: 239 Target_Length: 390 ln()_Score: 378
        *   .  *. * . *.*    . * * *   *   * *. *     .*.*
      1 CLLXSXDAKFP EDPKPCXXGDGEXIMK   LC NT LF S     ENSA      38
     20 C   TQPAQ PTQ PQP    E EKI KVGVLIPETGLYSSAGVAMKNAA      58

        *   .  * * ..*      * *         *   ***         . 
     39 E  GD PGLNLMQL      D P         L   KVD         R       56
     59 ELAAEHAG N VELVFADCGDSPEKAKTAFEYLVSQKVDAVVGAYSSPQA     106

        **..   **       * .*  * *   .*      * *  *  * *.  
     57 MVISQ  GE       S SSPVG I  TLT      F TD NLLY GI        82
    107 MVVADAAGENKVVYLVSVAS TGVIEKKVTEGNRYVFRTAYNTTYWGVLA     155

               * * .   .    .* *  *  * ** .*.    .. *  *  
     83        K DQR   I  XKVKGF  GRXLTAK HEV    KI V TKTF     110
    156 AEFLSLSKPD KYYFVGYDPLKTFNQG ML AKINELYGEPELEVYYK       200

        ** * *  * *.  *     * .  .**  *  * * * * .     *  
    111 SP VGP  Y NI  Q     G K VLIL  PISGTGQS N M T MVNV      140
    201 SPSVSPDDYKNVAKQIAERAGERDAIILGDP  G GVSINFLKEYRAN G     246

         . *. .*  *    *  * * * * * .    * .   ***  * *   
    141  RAIVSFS  G  K P  LVK N GET Y    L DV  TDLKITMKPES     172
    247 GKGII YSVGGALALPATLKKLNAGYTAFQAAALEETEKTDL  TAK        290

          * *.     * **  * * * * .   *  ..    *.* .    ** 
    173 SHYHFSNLFNGD KA LG D NMNVF   LN EN    SEAIY    KET     206
    291   Y FA     DYKAKFGEDAN N YAGLLTYDSIMILSQA FEKGGKE      328

         * *.     ** *   .*        * *   .** .   .. *.   *
    207 AKAID  R  SF G K LY        L G  VVKG V   IS KLP  Y     231
    329  KLIETLESGSFKGAAGIYRFNENHQALWGSEELKGTIGEFVNGKVEVVY     377

          . **  *
    232  AKFFADES     239
    378 PPE FA TS     384

# End_N: 1
# End_Alignments_Rank: 49
# Start_Alignments_Rank: 50
# Query: query_seq Target: SWALL:4HDB_CLOKL Number_of_Alignments: 1
# Target_Title: P38945 NAD-DEPENDENT 4-HYDROXYBUTYRATE DEHYDROGENASE (EC 1.1.1.61) (4HBD). 11/97                    
# N: 1 Raw_Score: 406 Query_Length: 239 Target_Length: 371 ln()_Score: 375
        **  . *  **   *.  *     * *. *  * *  *   * *  *  .
      2 LL XSXDA KF  PED PKP CXXGDGEXIMKLCNT L   FSE  N  S      37
      3 LLKLAPDVYKFDTAEEFMK YFKVGKGDFI  LTNEFLYKPFLEKFNDGA      49

         *   *    *.*    . *... * .  *  .* .*. *   *   .  
     38  A   E    GDPG   L NLMQLDPL  K VDRMVISQGESSS  PVG       69
     50 DAVFQEKYGLGEPSDEMINNIIK D IGDKQYNR IIAVG GGSVIDIAK      95

        * .* .* *.* *. *    .*..  *  *    * *  .*    *  * 
     70 I TLTFT DNL LY G    IKDQR IXKV  K GFGRXLT    A  K      100
     96 ILSLKYTDDSLDLFEGKVPLVKNKELII VPTTCGTGSEVTNVSVAELKR     144

         * . * * . .   *..   *  . * **   .   *   * *  * . 
    101  H EVK IVT K   TFS   P  V G PYN  IQGKVL ILPISGTGQ      132
    145 RHTK KGIASDELYATYAVLVPEFIKGLPYKFFVTSSV DAL IHAT EA     190

          *   *  * * .*.*  ..  .*  . .* * * . * .. . *  . 
    133   S   N MT MVNVRA  IVSFSG  KPLV KNG ETY LD VTDLKIT     167
    191 YVSPNANPYTDMFSVKAMELI LNGYMQ MVEK GND YRVEIIEDF V      234

        .    *.*  . . * * *     **    * * .*    * *    .* 
    168 MKPESSHYHFSNL F N G D  KAL    GDNMNV FLNE N    SEA     201
    235 I   GSNY  AGIAFGNAGVGAVHALSYPIGGNYHVPH GEANYLFFTE      277

        *.*   *     * * *  .  . *  *      *  *  .. * ..* *
    202 IYK   E   TAKAI D  R  SFG  K     LY  LG VV KGVIS K     228
    278 IFKTYYEKNPNGK IKDVNKLLA GILKCDESEAYDSLSQLLDK LLSRK     324

         *   *  *      *** *
    229 LP   YA K   F  FADES     239
    325  PLREYGMKEEEIETFAD S     342

# End_N: 1
# End_Alignments_Rank: 50
# ------------------------------------------------------
# Scan Completed at: Wed Feb 11 20:36:02 1998
# 
# Times:                              (Seconds)
# Load matrix, query and index:        0.0     0.0     0.0     0.0
# Load database:                       2.2     2.2     9.6     9.7
# Scan database:                      77.0    79.3    78.2    87.9
# Sort results :                       0.9    80.2     1.0    88.9
# Output scores:                       1.8    82.0     1.8    90.7
# Generate and write alignments:       1.2    83.2     1.2    92.0
# Millions of cell updates/sec in scan (CPU): 228.65 (Elapsed): 225.14