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OU Cryptococcus neoformans cDNA Sequence Blast Server Results

TBLASTN 1.3.9 [29-Oct-93]

Reference:  Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers,

and David J. Lipman (1990).  Basic local alignment search tool.  J. Mol. Biol.

215:403-410.

Notice:  statistical significance is estimated under the assumption that the

equivalent of one complete reading frame of the database codes for protein and

that significant alignments will involve only coding reading frames.

Query=  GI|1730209|SP|P54853|GBA1_CRYNE GUANINE NUCLEOTIDE-BINDING PROTEIN

                                ALPHA SUBUNIT

        (433 letters)

Database:  /hd1/apache/htdocs/blast_db/cneo_est

           635 sequences; 241,136 total letters.

Searching..................................................done

                                                                     Smallest

                                                                     Poisson

                                                     Reading  High  Probability

Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N

a2c03cr.r1                                                +1    52  0.00018   2

a1f01cr.r1                                                -3    40  0.00043   4

a3h10cr.f1                                                +2    66  0.0035    1

a1c05cr.r1                                                +2    63  0.011     1

a1d07cr.r1                                                -2    39  0.011     3

a3g09cr.f1                                                +1    62  0.016     1

a1h11cr.r1                                                +2    56  0.10      1

a4d11cr.f1                                                +1    55  0.13      1

a2c10cr.f1                                                -1    55  0.15      1

a3f07cr.r1                                                +2    55  0.15      1

a1f01cr.f1                                                +2    41  0.28      2

a1a12cr.f1                                                -2    52  0.28      1

a1e03cr.f1                                                -2    51  0.41      1

a1b02cr.r1                                                +2    36  0.47      2

a2c03cr.f1                                                -2    50  0.54      1

a4h05cr.r1                                                +3    40  0.81      2

a1f02cr.r1                                                -3    39  0.86      2

a2a10cr.r1                                                +2    46  0.90      1

a1h01cr.r1                                                +3    36  0.92      2

a1h04cr.r1                                                -2    46  0.93      1

a3a05cr.r1                                                -1    41  0.94      2

a4h08cr.r1                                                +1    38  0.94      2

a2b12cr.f1                                                +2    46  0.95      1

a2c04cr.r1                                                -2    41  0.95      2

a4d09cr.f1                                                -3    46  0.95      1

a4b10cr.r1                                                -3    41  0.95      2

a4d11cr.r1                                                +2    46  0.95      1

a3a01cr.r1                                                +3    46  0.95      1

a1f11cr.f1                                                +3    45  0.98      1

a3d12cr.f1                                                -2    45  0.98      1

a3f08cr.f1                                                +1    45  0.98      1

a4a08cr.r1                                                -2    45  0.98      1

>a2c03cr.r1

           Length = 484

  Plus Strand HSPs:

 Score = 52 (23.7 bits), Expect = 0.43, P = 0.35

 Identities = 12/38 (31%), Positives = 25/38 (65%), Frame = +1

Query:    24 STSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTA 61

             S+SS    +S+SA+++++ A +SA++ + +     TTA

Sbjct:   370 SSSSASSSSSSSASSSSSSAASSASSSSTSATVVRTTA 483

 Score = 51 (23.3 bits), Expect = 0.00018, Poisson P(2) = 0.00018

 Identities = 11/39 (28%), Positives = 25/39 (64%), Frame = +1

Query:    15 AETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTAN 53

             A+++Q   TS       AS+S++++A+ + +SAA+  ++

Sbjct:   331 AQSEQFNITSGGDSSSSASSSSSSSASSSSSSAASSASS 447

>a1f01cr.r1

           Length = 466

  Minus Strand HSPs:

 Score = 40 (18.2 bits), Expect = 21., P = 1.0

 Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = -3

Query:     1 MGGCMSTPEAPKKTAETKQVPS 22

             MGG    P+AP K    ++ P+

Sbjct:   428 MGGRGRPPKAPPKPPRPRKAPT 363

 Score = 39 (17.8 bits), Expect = 0.40, Poisson P(2) = 0.33

 Identities = 8/19 (42%), Positives = 11/19 (57%), Frame = -2

Query:    10 APKKTAETKQVPSTSTSSR 28

             A K +AET   P ++  SR

Sbjct:   411 ATKSSAETATAPESTNESR 355

 Score = 36 (16.4 bits), Expect = 0.00043, Poisson P(4) = 0.00043

 Identities = 7/16 (43%), Positives = 12/16 (75%), Frame = -2

Query:    34 TSATATAAGAGTSAAN 49

             T+  AT AG+G S+++

Sbjct:   111 TTLEATLAGSGNSSSS 64

 Score = 36 (16.4 bits), Expect = 0.00043, Poisson P(4) = 0.00043

 Identities = 7/18 (38%), Positives = 11/18 (61%), Frame = -3

Query:   353 LFKQKLPKVPLVQYFPEY 370

             +F   LP V ++ YFP +

Sbjct:    56 VFVFDLPLVQMLPYFPPH 3

>a3h10cr.f1

           Length = 347

  Plus Strand HSPs:

 Score = 41 (18.7 bits), Expect = 14., P = 1.0

 Identities = 12/57 (21%), Positives = 23/57 (40%), Frame = +2

Query:    14 TAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVGTSGG 70

             T       +T  ++   +A     ++A G   S    +  G +  +  ++RVG S G

Sbjct:   104 TGTQNSAHNTDNANNHTKAHLGPQSSARGVTGSRGGRSGGGGRVGSRGSSRVGGSSG 274

 Score = 36 (16.4 bits), Expect = 1.8, Poisson P(2) = 0.83

 Identities = 11/49 (22%), Positives = 17/49 (34%), Frame = +2

Query:    46 SAANGTANGIKGDTTATNRVGTSGGQGLAAALASTEPPGAQDSKGNKDR 94

             S+A G      G +    RVG+ G   +  +        A   +G   R

Sbjct:   176 SSARGVTGSRGGRSGGGGRVGSRGSSRVGGSSGGCSGSSAGCRRGGSGR 322

  Minus Strand HSPs:

 Score = 66 (30.1 bits), Expect = 0.0035, P = 0.0035

 Identities = 16/53 (30%), Positives = 28/53 (52%), Frame = -2

Query:    37 TATAAGAGTSAANGTANGIKGDTTATNRVGTSGGQGLAAALASTEPPGAQDSK 89

             + TAA + +SAA+G A+G   ++ A +   +S     +A  +S    GA  S+

Sbjct:   322 STTAASSASSAASGAASGAASNSAAASATDSSATSASSAPASSDSSSGALRSE 164

>a1c05cr.r1

           Length = 444

  Plus Strand HSPs:

 Score = 63 (28.7 bits), Expect = 0.011, P = 0.011

 Identities = 13/59 (22%), Positives = 34/59 (57%), Frame = +2

Query:    22 STSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVGTSGGQGLAAALAST 80

             +T+++S    +S++A +++A + ++A++ +A+     TT  +  G       AAA +++

Sbjct:   263 ATTSASESSSSSSAAQSSSAASSSAASSSSASSSAASTTHASSTGAGSSATSAAATSAS 439

 Score = 59 (26.9 bits), Expect = 0.042, P = 0.041

 Identities = 13/52 (25%), Positives = 27/52 (51%), Frame = +2

Query:     6 STPEAPKKTAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKG 57

             S+  +  +++      + S+SS    A+++  A++ GAG+SA +  A    G

Sbjct:   287 SSSSSAAQSSSAASSSAASSSSASSSAASTTHASSTGAGSSATSAAATSASG 442

  Minus Strand HSPs:

 Score = 45 (20.5 bits), Expect = 4.1, P = 0.98

 Identities = 12/35 (34%), Positives = 15/35 (42%), Frame = -3

Query:    46 SAANGTANGIKGDTTATNRVGTSGGQGLAAALAST 80

             SAA G+     G    + R    GG G+ A L  T

Sbjct:   262 SAATGSVGVTGGGGDGSARKTAGGGSGVEAGLGRT 158

 Score = 41 (18.7 bits), Expect = 0.10, Poisson P(2) = 0.098

 Identities = 11/33 (33%), Positives = 15/33 (45%), Frame = -3

Query:    40 AAGAGTSAANGTANGIKGDTTATNRVGTSGGQG 72

             AAG G S+ +G   G    +      G  GG+G

Sbjct:   442 AAGRGGSSRSGRRTGAGRRSVGGGCSGGRGGRG 344

 Score = 36 (16.4 bits), Expect = 2.6, Poisson P(2) = 0.93

 Identities = 8/34 (23%), Positives = 16/34 (47%), Frame = -3

Query:    31 QASTSATATAAGAGTSAANGTANGIKGDTTATNR 64

             +  +S +    GAG  +  G  +G +G    ++R

Sbjct:   433 RGGSSRSGRRTGAGRRSVGGGCSGGRGGRGRSSR 332

>a1d07cr.r1

           Length = 398

  Minus Strand HSPs:

 Score = 39 (17.8 bits), Expect = 28., P = 1.0

 Identities = 12/40 (30%), Positives = 16/40 (40%), Frame = -2

Query:    59 TTATNRVGTSGGQGLAAALASTEPPGAQDSKGNKDRSNQI 98

             +TA +   TSGG   AA  A T    +  S        Q+

Sbjct:   235 STAASGSFTSGGSTAAATYAITAAAASGSSTTESSGGEQV 116

 Score = 38 (17.3 bits), Expect = 0.60, Poisson P(2) = 0.45

 Identities = 11/48 (22%), Positives = 22/48 (45%), Frame = -2

Query:     1 MGGCMSTPEAPKKTAETKQVPSTSTSSRPPQASTSATATAAGAGTSAA 48

             MGG M   +     A    V   +T+    +++ ++ +  +G  T+AA

Sbjct:   328 MGGLMWALDGASTKAYGVGVVGNATAPSADKSTAASGSFTSGGSTAAA 185

 Score = 37 (16.9 bits), Expect = 0.011, Poisson P(3) = 0.011

 Identities = 12/45 (26%), Positives = 20/45 (44%), Frame = -2

Query:    10 APKKTAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANG 54

             A   +A+     S S +S    A+ +   TAA A  S+   ++ G

Sbjct:   259 ATAPSADKSTAASGSFTSGGSTAAATYAITAAAASGSSTTESSGG 125

>a3g09cr.f1

           Length = 441

  Plus Strand HSPs:

 Score = 62 (28.3 bits), Expect = 0.016, P = 0.016

 Identities = 13/32 (40%), Positives = 21/32 (65%), Frame = +1

Query:    22 STSTSSRPPQASTSATATAAGAGTSAANGTAN 53

             STS+    P +S +  ++AAGA   AA+G+A+

Sbjct:   217 STSSMEPAPASSRAGASSAAGASAGAASGSAS 312

 Score = 42 (19.2 bits), Expect = 0.053, Poisson P(2) = 0.052

 Identities = 9/19 (47%), Positives = 11/19 (57%), Frame = +3

Query:    11 PKKTAETKQVPSTSTSSRP 29

             P +T     +PSTSTS  P

Sbjct:   123 PNETTFIVHLPSTSTSPSP 179

>a1h11cr.r1

           Length = 422

  Plus Strand HSPs:

 Score = 56 (25.5 bits), Expect = 0.11, P = 0.10

 Identities = 15/51 (29%), Positives = 24/51 (47%), Frame = +2

Query:    10 APKKTAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTT 60

             +P  TA    +P   TSS P Q+  S+T+  +   +  A  ++    G TT

Sbjct:    44 SPSPTALFSPLPLPPTSSSPQQSQGSSTSQTSQQNSRPATSSSCSKNGITT 196

>a4d11cr.f1

           Length = 355

  Plus Strand HSPs:

 Score = 55 (25.1 bits), Expect = 0.14, P = 0.13

 Identities = 13/30 (43%), Positives = 17/30 (56%), Frame = +1

Query:    17 TKQVPSTSTSSRPPQASTSATATAAGAGTS 46

             T   P+TS  +     +TSAT TAA A T+

Sbjct:   253 TATAPTTSVETTSSPTATSATTTAAEATTT 342

>a2c10cr.f1

           Length = 473

  Minus Strand HSPs:

 Score = 55 (25.1 bits), Expect = 0.16, P = 0.15

 Identities = 15/40 (37%), Positives = 20/40 (50%), Frame = -1

Query:    24 STSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATN 63

             +T +    +S + T TAA   TSAAN T+      T  TN

Sbjct:   473 TTDAGTDDSSAAVTNTAAANTTSAANTTSAPTSSHTGLTN 354

 Score = 51 (23.3 bits), Expect = 0.59, P = 0.45

 Identities = 12/41 (29%), Positives = 22/41 (53%), Frame = -1

Query:    14 TAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANG 54

             T  T    +T +S+ P   + +A  TAA A + +++G+  G

Sbjct:   368 TGLTNYNTTTRSSTVPVSTTMAAQTTAAEASSDSSSGSGRG 246

>a3f07cr.r1

           Length = 485

  Plus Strand HSPs:

 Score = 55 (25.1 bits), Expect = 0.16, P = 0.15

 Identities = 12/45 (26%), Positives = 27/45 (60%), Frame = +2

Query:    10 APKKTAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANG 54

             A   + ++    STS SS    AST+++++A+ + +++++  A G

Sbjct:   155 AAASSVDSTSADSTSASSAASGASTASSSSASASTSASSDSGAKG 289

 Score = 49 (22.4 bits), Expect = 1.1, P = 0.68

 Identities = 11/49 (22%), Positives = 23/49 (46%), Frame = +2

Query:    22 STSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVGTSGG 70

             S ST +    +S  +T+  + + +SAA+G +       +A+    +  G

Sbjct:   134 SASTVAAAAASSVDSTSADSTSASSAASGASTASSSSASASTSASSDSG 280

>a1f01cr.f1

           Length = 406

  Plus Strand HSPs:

 Score = 40 (18.2 bits), Expect = 20., P = 1.0

 Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = +2

Query:     1 MGGCMSTPEAPKKTAETKQVPS 22

             MGG    P+AP K    ++ P+

Sbjct:   308 MGGRGRPPKAPPKPPRPRKAPT 373

 Score = 39 (17.8 bits), Expect = 0.32, Poisson P(2) = 0.28

 Identities = 8/19 (42%), Positives = 11/19 (57%), Frame = +1

Query:    10 APKKTAETKQVPSTSTSSR 28

             A K +AET   P ++  SR

Sbjct:   325 ATKSSAETATAPESTNESR 381

>a1a12cr.f1

           Length = 306

  Minus Strand HSPs:

 Score = 52 (23.7 bits), Expect = 0.33, P = 0.28

 Identities = 13/47 (27%), Positives = 24/47 (51%), Frame = -2

Query:    43 AGTSAANGTANGIKGDTTATNRVGTSGGQGLAAALASTEPPGAQDSK 89

             + +SAA+G A+G   ++ A +   +S     +A  +S    GA  S+

Sbjct:   305 SASSAASGAASGAASNSAAASATDSSATSASSAPASSDSSSGALRSE 165

>a1e03cr.f1

           Length = 374

  Minus Strand HSPs:

 Score = 51 (23.3 bits), Expect = 0.53, P = 0.41

 Identities = 12/41 (29%), Positives = 22/41 (53%), Frame = -2

Query:    14 TAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANG 54

             T  T    +T +S+ P   + +A  TAA A + +++G+  G

Sbjct:   367 TGLTNYNTTTRSSTVPVSTTMAAQTTAAEASSDSSSGSGRG 245

>a1b02cr.r1

           Length = 214

  Plus Strand HSPs:

 Score = 36 (16.4 bits), Expect = 0.63, Poisson P(2) = 0.47

 Identities = 8/18 (44%), Positives = 11/18 (61%), Frame = +2

Query:    18 KQVPSTSTSSRPPQASTS 35

             ++ PS  TS+ P   STS

Sbjct:    47 RKCPSPKTSNVPTLTSTS 100

 Score = 36 (16.4 bits), Expect = 0.63, Poisson P(2) = 0.47

 Identities = 8/18 (44%), Positives = 11/18 (61%), Frame = +2

Query:    23 TSTSSRPPQASTSATATA 40

             TSTS  PP+   S  A++

Sbjct:    89 TSTSRLPPKTPLSRLASS 142

>a2c03cr.f1

           Length = 420

  Minus Strand HSPs:

 Score = 50 (22.8 bits), Expect = 0.78, P = 0.54

 Identities = 16/55 (29%), Positives = 26/55 (47%), Frame = -2

Query:    22 STSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVGTSGGQGLAAA 76

             S S+SS       +  A++A A TSAA   ++     + +T    +SG    A+A

Sbjct:   410 SASSSSTSATVVRTTAASSASAATSAATSGSSASASGSNSTLPNTSSGASLTASA 246

 Score = 49 (22.4 bits), Expect = 1.1, P = 0.66

 Identities = 12/53 (22%), Positives = 22/53 (41%), Frame = -2

Query:    14 TAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVG 66

             ++ T      +T++    A+TSA  + + A  S +N T        + T   G

Sbjct:   401 SSSTSATVVRTTAASSASAATSAATSGSSASASGSNSTLPNTSSGASLTASAG 243

>a4h05cr.r1

           Length = 507

  Plus Strand HSPs:

 Score = 40 (18.2 bits), Expect = 21., P = 1.0

 Identities = 8/21 (38%), Positives = 13/21 (61%), Frame = +3

Query:     5 MSTPEAPKKTAETKQVPSTST 25

             +ST E PKK  +++   S+ T

Sbjct:   279 VSTEEPPKKKKKSEDAESSET 341

 Score = 37 (16.9 bits), Expect = 56., P = 1.0

 Identities = 8/16 (50%), Positives = 11/16 (68%), Frame = +3

Query:   101 QLEDDQKKFRKECKIL 116

             +L  ++KK RKE K L

Sbjct:    45 KLSKEEKKARKEAKKL 92

 Score = 37 (16.9 bits), Expect = 1.7, Poisson P(2) = 0.81

 Identities = 10/26 (38%), Positives = 14/26 (53%), Frame = +3

Query:    23 TSTSSRPPQASTSATATAAGAGTSAA 48

             T + S+  Q   +  + AA A TSAA

Sbjct:   375 TPSLSKKQQKKLAKASLAAAATTSAA 452

>a1f02cr.r1

           Length = 372

  Minus Strand HSPs:

 Score = 37 (16.9 bits), Expect = 51., P = 1.0

 Identities = 7/15 (46%), Positives = 10/15 (66%), Frame = -3

Query:   388 FTQTNRARLSVYPHL 402

             F+  +  RLS+ PHL

Sbjct:   112 FSNFSMVRLSIPPHL 68

 Score = 36 (16.4 bits), Expect = 2.0, Poisson P(2) = 0.86

 Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = -3

Query:   199 IPSEILYNIESLWHDPVIPSVM 220

             IP  ++   +S W  PVI  +M

Sbjct:   340 IPVAMMRMAQSAWEVPVIMFLM 275

>a2a10cr.r1

           Length = 289

  Plus Strand HSPs:

 Score = 46 (21.0 bits), Expect = 2.3, P = 0.90

 Identities = 10/22 (45%), Positives = 14/22 (63%), Frame = +2

Query:    18 KQVPSTSTSSRPPQASTSATAT 39

             + VPST T +RP + ST   A+

Sbjct:    92 RSVPSTLTMARPTRFSTRRLAS 157

>a1h01cr.r1

           Length = 432

  Plus Strand HSPs:

 Score = 36 (16.4 bits), Expect = 2.5, Poisson P(2) = 0.92

 Identities = 8/18 (44%), Positives = 11/18 (61%), Frame = +3

Query:    18 KQVPSTSTSSRPPQASTS 35

             ++ PS  TS+ P   STS

Sbjct:    21 RKCPSPKTSNVPTLTSTS 74

 Score = 36 (16.4 bits), Expect = 2.5, Poisson P(2) = 0.92

 Identities = 8/18 (44%), Positives = 11/18 (61%), Frame = +3

Query:    23 TSTSSRPPQASTSATATA 40

             TSTS  PP+   S  A++

Sbjct:    63 TSTSRLPPKTPLSRLASS 116

>a1h04cr.r1

           Length = 340

  Minus Strand HSPs:

 Score = 46 (21.0 bits), Expect = 2.6, P = 0.93

 Identities = 10/31 (32%), Positives = 17/31 (54%), Frame = -2

Query:   272 GQLSIHMFDVGGQRSERKKWIHCFEAVTSII 302

             G+ ++  F+ G Q  +R++W  C   V  II

Sbjct:   252 GESAVVPFERGAQVFKRQEWDECGVRVVRII 160

>a3a05cr.r1

           Length = 458

  Minus Strand HSPs:

 Score = 37 (16.9 bits), Expect = 54., P = 1.0

 Identities = 7/15 (46%), Positives = 10/15 (66%), Frame = -1

Query:   388 FTQTNRARLSVYPHL 402

             F+  +  RLS+ PHL

Sbjct:   152 FSNFSMVRLSIPPHL 108

 Score = 36 (16.4 bits), Expect = 2.7, Poisson P(2) = 0.94

 Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = -1

Query:   199 IPSEILYNIESLWHDPVIPSVM 220

             IP  ++   +S W  PVI  +M

Sbjct:   380 IPVAMMRMAQSAWEVPVIMFLM 315

>a4h08cr.r1

           Length = 464

  Plus Strand HSPs:

 Score = 38 (17.3 bits), Expect = 40., P = 1.0

 Identities = 9/28 (32%), Positives = 13/28 (46%), Frame = +1

Query:   379 KAAKYILWRFTQTNRARLSVYPHLTQAT 406

             + +K +L R    N+    VYP L   T

Sbjct:   265 ETSKEVLERLAHLNQLYCKVYPGLRYIT 348

 Score = 36 (16.4 bits), Expect = 2.8, Poisson P(2) = 0.94

 Identities = 8/20 (40%), Positives = 12/20 (60%), Frame = +1

Query:   212 HDPVIPSVMDRSSEFYLMDS 231

             H  ++PSV++R S   L  S

Sbjct:    61 HTLLVPSVLERLSSSSLPQS 120

>a2b12cr.f1

           Length = 439

  Plus Strand HSPs:

 Score = 46 (21.0 bits), Expect = 2.9, P = 0.95

 Identities = 11/37 (29%), Positives = 18/37 (48%), Frame = +2

Query:     7 TPEAPKKTAETKQVPSTSTSSRPPQASTSATATAAGA 43

             +P AP  +A+     +T   S+P    + +T  A GA

Sbjct:   284 SPSAPFASAKALSYTATFVISKPSSQVSRSTINAPGA 394

>a2c04cr.r1

           Length = 483

  Minus Strand HSPs:

 Score = 37 (16.9 bits), Expect = 55., P = 1.0

 Identities = 7/15 (46%), Positives = 10/15 (66%), Frame = -2

Query:   388 FTQTNRARLSVYPHL 402

             F+  +  RLS+ PHL

Sbjct:   107 FSNFSMVRLSIPPHL 63

 Score = 36 (16.4 bits), Expect = 2.9, Poisson P(2) = 0.95

 Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = -2

Query:   199 IPSEILYNIESLWHDPVIPSVM 220

             IP  ++   +S W  PVI  +M

Sbjct:   335 IPVAMMRMAQSAWEVPVIMFLM 270

>a4d09cr.f1

           Length = 479

  Minus Strand HSPs:

 Score = 46 (21.0 bits), Expect = 3.0, P = 0.95

 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = -3

Query:    22 STSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVG 66

             ++S+SS P  +S S T   +    S   G   G+K D  A + +G

Sbjct:   198 TSSSSSSPGSSSLSPTEGPSPRLGSPPTGLLPGLKLDILARHAMG 64

>a4b10cr.r1

           Length = 492

  Minus Strand HSPs:

 Score = 37 (16.9 bits), Expect = 55., P = 1.0

 Identities = 7/15 (46%), Positives = 10/15 (66%), Frame = -3

Query:   388 FTQTNRARLSVYPHL 402

             F+  +  RLS+ PHL

Sbjct:   142 FSNFSMVRLSIPPHL 98

 Score = 36 (16.4 bits), Expect = 3.0, Poisson P(2) = 0.95

 Identities = 8/22 (36%), Positives = 12/22 (54%), Frame = -3

Query:   199 IPSEILYNIESLWHDPVIPSVM 220

             IP  ++   +S W  PVI  +M

Sbjct:   370 IPVAMMRMAQSAWEVPVIMFLM 305

>a4d11cr.r1

           Length = 488

  Plus Strand HSPs:

 Score = 46 (21.0 bits), Expect = 3.0, P = 0.95

 Identities = 18/101 (17%), Positives = 35/101 (34%), Frame = +2

Query:     7 TPEAPKKTAETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVG 66

             TP  P  ++ ++   S    S   ++S+S          + A  T         +++   

Sbjct:   179 TPTPPPASSSSESEDSEEEDSSDSESSSSEDEKPVAKTVAPAAETKEEESSSDESSDSDS 358

Query:    67 TSGGQGLAAALASTEPPGAQDSKGNKDRSNQIDRQLEDDQK 107

              S  +    A    E     DS  + D  +  D   ++D+K

Sbjct:   359 DSESEEEPKAETKEEVSKESDSDSDSDSDSDSDASDDEDEK 481

>a3a01cr.r1

           Length = 513

  Plus Strand HSPs:

 Score = 46 (21.0 bits), Expect = 3.1, P = 0.95

 Identities = 17/71 (23%), Positives = 27/71 (38%), Frame = +3

Query:    18 KQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKGDTTATNRVGTSGGQGLAAAL 77

             K   ST T +        A ++ A   T+A+    +     TTA++     GG    +A 

Sbjct:   294 KITDSTGTVAYSSPIVVQAGSSQACLNTTASTSGLSSAAVTTTASDTNAAGGGAATTSAS 473

Query:    78 ASTEPPGAQDS 88

              S+    A  S

Sbjct:   474 ESSSSSSAAQS 506

  Minus Strand HSPs:

 Score = 45 (20.5 bits), Expect = 4.3, P = 0.99

 Identities = 12/35 (34%), Positives = 15/35 (42%), Frame = -2

Query:    46 SAANGTANGIKGDTTATNRVGTSGGQGLAAALAST 80

             SAA G+     G    + R    GG G+ A L  T

Sbjct:   455 SAATGSVGVTGGGGDGSARKTAGGGSGVEAGLGRT 351

>a1f11cr.f1

           Length = 408

  Plus Strand HSPs:

 Score = 45 (20.5 bits), Expect = 3.9, P = 0.98

 Identities = 10/48 (20%), Positives = 26/48 (54%), Frame = +3

Query:   100 RQLEDDQKKFRKECKILLLGSGESGKSTIVKQMKIIHQNGYSKDELLS 147

             R L +  ++ ++E +   LG   +G   +V  +++  +N Y++ + L+

Sbjct:    60 RMLHNLSRREQREQRKPTLGREWNGNLNLV*SLQLAKENSYARSQTLT 203

>a3d12cr.f1

           Length = 435

  Minus Strand HSPs:

 Score = 45 (20.5 bits), Expect = 4.0, P = 0.98

 Identities = 10/38 (26%), Positives = 18/38 (47%), Frame = -2

Query:    68 SGGQGLAAALASTEPPGAQDSKGNKDRSNQIDRQLEDD 105

             SGG   AAA       GA ++   +++  +   + +DD

Sbjct:   263 SGGAAPAAAAGGAAAGGAAEAAPAEEKKEEAKEESDDD 150

>a3f08cr.f1

           Length = 457

  Plus Strand HSPs:

 Score = 45 (20.5 bits), Expect = 4.1, P = 0.98

 Identities = 13/43 (30%), Positives = 22/43 (51%), Frame = +1

Query:    15 AETKQVPSTSTSSRPPQASTSATATAAGAGTSAANGTANGIKG 57

             A T    S+S SS     STS+ ++ + A ++A   +  G+ G

Sbjct:   250 APTSCGSSSSLSSSQISCSTSSPSSKSTATSNARAASTRGLSG 378

>a4a08cr.r1

           Length = 485

  Minus Strand HSPs:

 Score = 45 (20.5 bits), Expect = 4.2, P = 0.98

 Identities = 10/24 (41%), Positives = 13/24 (54%), Frame = -2

Query:    14 TAETKQVPSTSTSSRPPQASTSAT 37

             +   ++VP    SSRP   STS T

Sbjct:   265 SVSVREVPG*HLSSRPSNPSTSRT 194

Parameters:

  E = 5.0, S = 46 (21.0 bits),  E2 = 0.11, S2 = 36

  W = 3, T = 13 (5.9 bits), X = 22 (10.0 bits)

  M = BLOSUM62

  C = 0 (Standard genetic code)

  H = 0, V = 500, B = 250

  -gapdecayrate 0.5 (the default)

Statistics:

  Lambda = 0.316, Lambda/ln2 = 0.456, K = 0.132, H = 0.532 bits/position

  Expected/Observed high score = 48 (21.9 bits) / 66 (30.1 bits)

  # of letters in query:  433 aa

  # of neighborhood words in query:  2654

  # of exact words scoring below T:  23

  Database:  /hd1/apache/htdocs/blast_db/cneo_est

  # of letters in database:  241,136 bp

  # of word hits against database:  104,918

  # of failed hit extensions:  90,297

  # of successful extensions:  279

  # of overlapping HSPs discarded:  220

  # of HSPs reportable:  59

  # of sequences in database:  635

  # of db sequences with at least one HSP:  32

No. of states in DFA:  527 (52 KB)

Total size of DFA:  82 KB (96 KB)

Time to generate neighborhood:  0.01u 0.00s 0.01t  Real: 00:00:00

No. of processors used:  1

Time to search database:  0.35u 0.01s 0.36t  Real: 00:00:01

Total cpu time:  0.43u 0.04s 0.47t  Real: 00:00:01