Anonymous (503 letters)
 |
| COG0554 |
|---|
| BeTs to 4 clades: |
| Proteobacteria (gamma subdivision) |  |
| Gram-positive bacteria |  |
| Cyanobacteria |  |
| Eukarya (Fungi) |  |
|
|
1 
2561 
HIN0108 (503)
1 
2041 glpK (502)
1 
1244 MG038 (508)
1 
1176 MP104 (508)
1 
1092 slr1672 (495)
1 
774 YHL032c (709)
1 251 xylB (484)
1 207 ec1787789 (530)
1 202 bla_ygcE (492)
1 196 xylK (498)
1 185 fucK (482)
1 170 HIN0525 (511)
1 165 HIN0443 (485)
1 156 HIN0031 (470)
1 150 ygcE (374)
1 77 slr1420 (425)
1 75 araB (566)
1 74 
yeiO (393) - yihN
1 73 bla_araB (566)
2 70 rhaB (489)
1 68 bla_gltB_3 (316) - bla_gltB_3
1 66 YJR032w (393) - ppiA
1 65 putP (502) - yjcG
1 64 yicK (394) - yihN
1 64 slr0018 (466) - fumC
1 63 tehA (330)
1 63 HIN0052 (394) - selB
1 63 HIN1699 (394) - selB
1 62 MP622 (808) - bla_secA
1 61 HIN1157 (479) - bla_ygjE
1 
61 HP0476 (463) - gltX
1 
61 MJ0956 (260)
BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anonymous
(503 letters)
Database: dixu
20,772 sequences; 7,470,131 total letters
Score E
Sequences producing significant alignments: (bits) Value
HIN0108 glpK 132009..133520 1001 0.0
glpK 502 799 0.0
MG038 glycerol kinase (glpK) {Escherichia coli} 488 e-138
MP104 142961..144487 462 e-130
slr1672 1952323..1953810 429 e-120
YHL032c GUT1/YHL032c Glycerol kinase, converts glycerol to gly... 305 2e-83
xylB 484 102 5e-22
ec1787789 complement(1596641..1598233) 85 7e-17
bla_ygcE gi:1789138 2899693..2901171 83 3e-16
xylK 498 81 1e-15
fucK 482 76 3e-14
HIN0525 xylB 576173..577708 71 2e-12
HIN0443 xylK complement(488617..490074) 69 6e-12
HIN0031 fucK complement(40812..42224) 65 7e-11
ygcE 374 63 4e-10
slr1420 3272165..3273442 34 0.13
araB 566 34 0.22
yeiO 393 33 0.29
bla_araB gi:1786249 complement(68348..70048) 33 0.38
rhaB 489 32 0.85
bla_gltB_3 31 1.5
YJR032w CPR7/J1585/YJR032w Cyclophilin, homolog of mammalian c... 30 2.5
putP 502 30 3.3
yicK 394 29 4.3
slr0018 2488028..2489428 29 4.3
tehA 330 29 5.6
HIN0052 tufA 68685..69869 29 5.6
HIN1699 tufB complement(1823653..1824837) 29 5.6
MP622 complement(763192..765618) 29 7.4
HIN1157 ygjE complement(1248380..1249819) 28 9.7
HP0476 glutamyl-tRNA synthetase (gltX) {Escherichia coli} 28 9.7
MJ0956 28 9.7
# >HIN0108 glpK 132009..133520
# Length = 503
#
# Score = 1001 bits (2561), Expect = 0.0
# Identities = 489/503 (97%), Positives = 489/503 (97%)
#
# Query: 1 MTDKKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSST 60
# MTDKKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSST
# Sbjct: 1 MTDKKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSST 60
#
# Query: 61 LNEVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADG 120
# LNEVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADG
# Sbjct: 61 LNEVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADG 120
#
# Query: 121 HEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVH 180
# HEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVH
# Sbjct: 121 HEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVH 180
#
# Query: 181 VTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPV 240
# VTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPV
# Sbjct: 181 VTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPV 240
#
# Query: 241 AGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEPE 300
# AGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEPE
# Sbjct: 241 AGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEPE 300
#
# Query: 301 YALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPYWDPY 360
# YALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPYWDPY
# Sbjct: 301 YALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPYWDPY 360
#
# Query: 361 ARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFLM 420
# ARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFLM
# Sbjct: 361 ARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFLM 420
#
# Query: 421 QFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRDKARVERTFSPDSDNEKR 480
# QFQADILDVNVERPVVKEV FWKDLDELRDKARVERTFSPDSDNEKR
# Sbjct: 421 QFQADILDVNVERPVVKEVTALGAAYLAGLATGFWKDLDELRDKARVERTFSPDSDNEKR 480
#
# Query: 481 ERRYKGWKKAVKRSLEWAKEDEE 503
# ERRYKGWKKAVKRSLEWAKEDEE
# Sbjct: 481 ERRYKGWKKAVKRSLEWAKEDEE 503
#
#
# >glpK 502
# Length = 502
#
# Score = 799 bits (2041), Expect = 0.0
# Identities = 373/502 (74%), Positives = 433/502 (85%)
#
# Query: 1 MTDKKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSST 60
# MT+KKYI+ALDQGTTSSRAV++DH+AN++ ++QREF QIYP+ GWVEH+PMEIWATQSST
# Sbjct: 1 MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSST 60
#
# Query: 61 LNEVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADG 120
# L EV+AKA I+SD+IAAIGITNQRETTIVWEK TG P+YNAIVWQCRRTA+I + LK DG
# Sbjct: 61 LVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDG 120
#
# Query: 121 HEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVH 180
# E+YIR+ TGLV+DPYFSGTKVKWILD+VEG+RE+A RGELLFGTVDTWL+WK+TQGRVH
# Sbjct: 121 LEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVH 180
#
# Query: 181 VTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPV 240
# VTDYTNASRTMLFNIHT WDDKMLE+L+IPR MLPEVR SSE+YGQTNIGGKGG RIP+
# Sbjct: 181 VTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPI 240
#
# Query: 241 AGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEPE 300
# +GIAGDQQAAL+G LCV G AKNTYGTGCFML++TG KA+ S+NGLLTTIAC GE
# Sbjct: 241 SGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVN 300
#
# Query: 301 YALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPYWDPY 360
# YALEG+VF+AGASIQWLRDE+K+++D++DSEYFA KV ++NGVYVVPAFTGLGAPYWDPY
# Sbjct: 301 YALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPY 360
#
# Query: 361 ARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFLM 420
# ARGAIFGL+RG N NHI+RATLESIAYQTRDVLEAMQ+DSG RL LRVDGGA NNFLM
# Sbjct: 361 ARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM 420
#
# Query: 421 QFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRDKARVERTFSPDSDNEKR 480
# QFQ+DIL VERP V+EV FW++LDEL++KA +ER F P + +R
# Sbjct: 421 QFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTER 480
#
# Query: 481 ERRYKGWKKAVKRSLEWAKEDE 502
# RY GWKKAVKR++ W + DE
# Sbjct: 481 NYRYAGWKKAVKRAMAWEEHDE 502
#
#
# >MG038 glycerol kinase (glpK) {Escherichia coli}
# Length = 508
#
# Score = 488 bits (1244), Expect = e-138
# Identities = 239/505 (47%), Positives = 335/505 (66%), Gaps = 8/505 (1%)
#
# Query: 4 KKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNE 63
# K+YIIALD+GT+S R+++ DHN N + IAQ EF +P +GWVE +P+EIW+ Q +T+
# Sbjct: 5 KQYIIALDEGTSSCRSIVFDHNLNQIAIAQNEFNTFFPNSGWVEQDPLEIWSAQLATMQS 64
#
# Query: 64 VVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGH-E 122
# KA I S E+ A+GITNQRET ++W K G PVYNAIVWQ +RTA + K D +
# Sbjct: 65 AKNKAQIKSHEVIAVGITNQRETIVLWNKENGLPVYNAIVWQDQRTAALCQKFNEDKLIQ 124
#
# Query: 123 EYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVT 182
# ++ TGL ++PYFS TK+ WIL NV A++ E+ +LLFGT+D+WL+WKLT G++HVT
# Sbjct: 125 TKVKQKTGLPINPYFSATKIAWILKNVPLAKKLMEQKKLLFGTIDSWLIWKLTNGKMHVT 184
#
# Query: 183 DYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYG--QTNIGGKGGVRI-P 239
# D +NASRT+LF+I +W ++ ++ +P S+LP+V +S+ +G +TN I P
# Sbjct: 185 DVSNASRTLLFDIVKMEWSKELCDLFEVPVSILPKVLSSNAYFGDIETNHWSSNAKGIVP 244
#
# Query: 240 VAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEP 299
# + + GDQQAAL+G LC G KNTYGTGCF+L++ G+K SK+ LLTT+A + P
# Sbjct: 245 IRAVLGDQQAALFGQLCTEPGMVKNTYGTGCFVLMNIGDKPTLSKHNLLTTVAWQLENHP 304
#
# Query: 300 E-YALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQ--KVTDSNGVYVVPAFTGLGAPY 356
# YALEGSVF+AGA+I+WLRD LKI++ +S+++A+ K + N V+V PAF+GLGAP+
# Sbjct: 305 PVYALEGSVFVAGAAIKWLRDALKIIYSEKESDFYAELAKENEQNLVFV-PAFSGLGAPW 363
#
# Query: 357 WDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNN 416
# WD ARG I G+ R HIV+A+LESIA+QT D+L AM SD G ++ ++ DGG +
# Sbjct: 364 WDASARGIILGIEASTKREHIVKASLESIAFQTNDLLNAMASDLGYKITSIKADGGIVKS 423
#
# Query: 417 NFLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRDKARVERTFSPDSD 476
# N+LMQFQADI DV V P KE FWKD+ +L +++ F D
# Sbjct: 424 NYLMQFQADIADVIVSIPKNKETTAVGVCFLAGLACGFWKDIHQLEKLTTLDKKFKSTMD 483
#
# Query: 477 NEKRERRYKGWKKAVKRSLEWAKED 501
# R+ + W KAV+R+L+W + D
# Sbjct: 484 PNIRKTKINSWHKAVERALKWKEID 508
#
#
# >MP104 142961..144487
# Length = 508
#
# Score = 462 bits (1176), Expect = e-130
# Identities = 225/504 (44%), Positives = 319/504 (62%), Gaps = 6/504 (1%)
#
# Query: 4 KKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNE 63
# ++YI+ALD+GT+S R ++ D + N V IAQ EF Q +P++GWVE +P+EIW+ Q +T+
# Sbjct: 5 QQYILALDEGTSSCRTIVFDKDLNQVAIAQNEFNQFFPKSGWVEQDPLEIWSVQLATMQS 64
#
# Query: 64 VVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGH-E 122
# KA I S+ IAA+GITNQRET ++W K G PVYNAIVWQ +RTA + DKL D +
# Sbjct: 65 AKNKAQIKSNNIAAVGITNQRETIVLWNKENGLPVYNAIVWQDQRTASLCDKLNQDTKIK 124
#
# Query: 123 EYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVT 182
# E+++ TGL ++PYFS TK+ WIL+NV A++ + +LL GT+DTWL+WKLT G++HVT
# Sbjct: 125 EFVKKHTGLPINPYFSATKIAWILENVPLAQKMLKEDKLLAGTIDTWLIWKLTGGKMHVT 184
#
# Query: 183 DYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQ---TNIGGKGGVRIP 239
# D +NASRT+LF+I T W ++ +I +P S+LP+V S+ +G ++ +P
# Sbjct: 185 DVSNASRTLLFDITTMTWSQELGDIFKVPLSILPKVMPSNAHFGDIVPSHWSTSATGMVP 244
#
# Query: 240 VAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGE- 298
# + G+AGDQQAAL+G LCV KNTYGTGCFML++ GN+ S++ LLTT+A + +
# Sbjct: 245 IRGVAGDQQAALFGQLCVEPAMVKNTYGTGCFMLMNIGNELKYSQHNLLTTVAWQLENQK 304
#
# Query: 299 PEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKV-TDSNGVYVVPAFTGLGAPYW 357
# P YALEGSVF+AGA+++WLRD LK+++ + +S+++A+ + V VPAFTGLGAPYW
# Sbjct: 305 PVYALEGSVFVAGAALKWLRDSLKVMYSAAESDFYAKLAQKEEQEVVFVPAFTGLGAPYW 364
#
# Query: 358 DPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNN 417
# D ARGAIFG+ R H+V+ DGGA N+N
# Sbjct: 365 DASARGAIFGIEANTKREHLVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGACNSN 424
#
# Query: 418 FLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRDKARVERTFSPDSDN 477
# +LMQFQADI ++ V P E +WKD +L + + F +
# Sbjct: 425 YLMQFQADIANLEVIIPKNVETTTMGAAFLAGLAVNYWKDTKQLEKLTGIAKQFKSQMNQ 484
#
# Query: 478 EKRERRYKGWKKAVKRSLEWAKED 501
# RE++ K W +AVKR+L+WA D
# Sbjct: 485 TVREKKSKRWNEAVKRTLKWASLD 508
#
#
# >slr1672 1952323..1953810
# Length = 495
#
# Score = 429 bits (1092), Expect = e-120
# Identities = 212/437 (48%), Positives = 295/437 (66%), Gaps = 7/437 (1%)
#
# Query: 5 KYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNEV 64
# +Y++ALD GTT +RA+L D+ N+V A +E TQ YP+AGWVEH+ +EIW + + EV
# Sbjct: 7 QYVMALDLGTTGNRAILFDYEGNIVGQAYKELTQFYPKAGWVEHDALEIWRDTKTVMQEV 66
#
# Query: 65 VAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEY 124
# V K I +I AIG+T QRET ++W+K+TG P++ AIVWQ RRTA +L A G+ +
# Sbjct: 67 VQKTAIQPQQIVAIGLTVQRETCLLWDKTTGQPLHPAIVWQDRRTAHFCGELTAAGYVDE 126
#
# Query: 125 IRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVTDY 184
# I TGLV+D YFSGTK+ W+LD V+ ++ + LL GT+D+W +W LT G+VH TD+
# Sbjct: 127 IYERTGLVLDAYFSGTKLHWLLDWVKQSK-SVDPANLLAGTIDSWALWNLTGGKVHRTDH 185
#
# Query: 185 TNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPVAGIA 244
# +NASRTM+ N+ + WD+K+L++ IP ++PEV+ S +G T+ GV IP+ I
# Sbjct: 186 SNASRTMVLNLDSLIWDEKLLDLFTIPAQIMPEVQPSLSYFGVTD-PEILGVEIPITAIF 244
#
# Query: 245 GDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEP----- 299
# GDQQAALY H C G K TYGTG F++ +TG S++ LL+T+A
# Sbjct: 245 GDQQAALYAHGCDRPGLLKCTYGTGAFLVANTGQTVTRSQHRLLSTVAWTQTNRDKSLTR 304
#
# Query: 300 EYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPYWDP 359
# +YALEGS+F AG+ +QWLRD+L ++ + SE A+ V + GVY VPA +GLGAP+WD
# Sbjct: 305 DYALEGSMFTAGSCVQWLRDKLGLIESAAASESLARSVDSNGGVYFVPALSGLGAPHWDM 364
#
# Query: 360 YARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFL 419
# A GA GL+ G + H+VR+ LE+IA+Q R+V+EA+ DS +Q L+VDGGA NN+FL
# Sbjct: 365 NACGAFLGLTAGVTKAHLVRSVLEAIAFQAREVVEAINQDSPAPIQQLKVDGGACNNDFL 424
#
# Query: 420 MQFQADILDVNVERPVV 436
# MQ QAD+L + VERP V
# Sbjct: 425 MQCQADVLGIPVERPAV 441
#
#
# >YHL032c GUT1/YHL032c Glycerol kinase, converts glycerol to
# glycerol-3-phosphate.
# Length = 709
#
# Score = 305 bits (774), Expect = 2e-83
# Identities = 198/557 (35%), Positives = 286/557 (50%), Gaps = 89/557 (15%)
#
# Query: 35 EFTQIYPRAGWVEHNPMEIWAT----------QSSTLNEVVAKAGITSDEIAAIGITNQR 84
# E T +P+ GWVE +P ++ T+N G+ ++ +GI N R
# Sbjct: 142 EPTLKFPKPGWVECHPQKLLVNVVQCLASSLLSLQTINSERVANGLPPYKVICMGIANMR 201
#
# Query: 85 ETTIVWEKSTGTPVYN-AIVWQCRRTADIT-DKLKADGHEEYI--RNTTGL-VVDPYFSG 139
# ETTI+W + TG P+ N IVW RT I DK + + + R TGL ++ YFS
# Sbjct: 202 ETTILWSRRTGKPIVNYGIVWNDTRTIKIVRDKWQNTSVDRQLQLRQKTGLPLLSTYFSC 261
#
# Query: 140 TKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVTDYTNASRTMLFNIHTKQ 199
# +K++W LDN + E +L+FGTVDTWL+++LT+ + V+D TNASRT N+ T +
# Sbjct: 262 SKLRWFLDNEPLCTKAYEENDLMFGTVDTWLIYQLTKQKAFVSDVTNASRTGFMNLSTLK 321
#
# Query: 200 WDDKMLEILNIPRSML--PEVRNSSEIYGQTNI----------GGKGGVR------IPVA 241
# +D+++LE I ++++ PE+ +SS+ YG I K +R +P+
# Sbjct: 322 YDNELLEFWGIDKNLIHMPEIVSSSQYYGDFGIPDWIMEKLHDSPKTVLRDLVKRNLPIQ 381
#
# Query: 242 GIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIAC-------- 293
# G GDQ A++ G L G AK TYGTGCF+L +TG K + S++G LTT+A
# Sbjct: 382 GCLGDQSASMVGQLAYKPGAAKCTYGTGCFLLYNTGTKKLISQHGALTTLAFWFPHLQEY 441
#
# Query: 294 ----NAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAF 349
# +P +ALEGSV +AGA +QWLRD L+++ S D A V DS GV VPAF
# Sbjct: 442 GGQKPELSKPHFALEGSVAVAGAVVQWLRDNLRLIDKSEDVGPIASTVPDSGGVVFVPAF 501
#
# Query: 350 TGLGAPYWDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDS-GE------ 402
# +GL APYWDP AR I G+S+ +HI RA +E + +Q R +L+AM SD+ GE
# Sbjct: 502 SGLFAPYWDPDARATIMGMSQFTTASHIARAAVEGVCFQARAILKAMSSDAFGEGSKDRD 561
#
# Query: 403 -------------RLQYLRVDGGATNNNFLMQFQADILD--VNVERPVVKEVXXXXXXXX 447
# L L VDGG + +N +MQ QADIL V V R E
# Sbjct: 562 FLEEISDVTYEKSPLSVLAVDGGMSRSNEVMQIQADILGPCVKVRRSPTAECTALGAAIA 621
#
# Query: 448 XXXXXX------FWKDLDELR-----------DKARVE-----RTFSPDSDNEKRERRYK 485
# WKDL +++ ++ E + F +SD+ +R + +K
# Sbjct: 622 ANMAFKDVNERPLWKDLHDVKKWVFYNGMEKNEQISPEAHPNLKIFRSESDDAERRKHWK 681
#
# Query: 486 GWKKAVKRSLEWAKEDE 502
# W+ AV+RS W K+ E
# Sbjct: 682 YWEVAVERSKGWLKDIE 698
#
#
# >xylB 484
# Length = 484
#
# Score = 102 bits (251), Expect = 5e-22
# Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 30/428 (7%)
#
# Query: 8 IALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNEVVAK 67
# I +D GT+ + +LL+ VV + T P W E +P + W + + +
# Sbjct: 3 IGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQ 62
#
# Query: 68 AGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEYIRN 127
# + ++ A+GI Q + + + AI+W R A L+A + R
# Sbjct: 63 HSL--QDVKALGIAGQMHGATLLDAQQRV-LRPAILWNDGRCAQECTLLEARVPQS--RV 117
#
# Query: 128 TTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWK----LTQGRVHVTD 183
# TG ++ P F+ K+ W+ R + E +F +D L+ K L +D
# Sbjct: 118 ITGNLMMPGFTAPKLLWV------QRHEPE----IFRQIDKVLLPKDYLRLRMTGEFASD 167
#
# Query: 184 YTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTN---IGGKGGVRIPV 240
# ++A+ TM ++ + W D ML+ ++ R +P + SEI G G +PV
# Sbjct: 168 MSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPV 227
#
# Query: 241 AGIAGDQQAALYGHLCVHAGQAKNTYGT-GCFMLLHTGNKAITSKNGLLTTIACNAKGEP 299
# GD A G V A QA + GT G + + G SK C+A +
# Sbjct: 228 VAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEG---FLSKPESAVHSFCHALPQR 284
#
# Query: 300 EYALEGSVFIAGAS-IQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPYWD 358
# + + SV ++ AS + W + + Q + V+ +P +G P+ +
# Sbjct: 285 WHLM--SVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNN 342
#
# Query: 359 PYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNF 418
# P A+G FGL+ N + RA LE + Y D ++ + + G + Q + + GG + +
# Sbjct: 343 PQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHA-CGIKPQSVTLIGGGARSEY 401
#
# Query: 419 LMQFQADI 426
# Q ADI
# Sbjct: 402 WRQMLADI 409
#
#
# >ec1787789 complement(1596641..1598233)
# Length = 530
#
# Score = 85.0 bits (207), Expect = 7e-17
# Identities = 110/507 (21%), Positives = 200/507 (38%), Gaps = 52/507 (10%)
#
# Query: 4 KKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQ--IYPRAGWVEHNPMEIWATQSSTL 61
# K Y++ALD GT S RAV+ D N + + Q E+ + G +E + + W +
# Sbjct: 11 KYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECM 70
#
# Query: 62 NEVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITD--KLKAD 119
# + + AGI + IAA+ + RE +++ + G P++ R ++++ +L +
# Sbjct: 71 RQALHNAGIAPEYIAAVSACSMREGIVLY-NNEGAPIWACANVDARAAREVSELKELHNN 129
#
# Query: 120 GHEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRV 179
# E + TG + + ++ W+ + R R + WL + L+ G +
# Sbjct: 130 TFENEVYRATGQTL-ALSAIPRLLWLAHH----RSDIYRQASTITMISDWLAYMLS-GEL 183
#
# Query: 180 HVTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTN------IGGK 233
# V D +NA T L ++ T+ W +L++ + +L V+ + + G + G K
# Sbjct: 184 AV-DPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLK 242
#
# Query: 234 GGVRIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIAC 293
# G + V G GD Q G V Q GT + + + +T
# Sbjct: 243 AGTPVVVGG--GDVQLGCLGLGVVRPAQTAVLGGTFW--------QQVVNLAAPVTDPEM 292
#
# Query: 294 NAKGEPEYALEGSV------FIAGASIQWLRD----ELKIVHDSFDSEYFAQKVTDSNGV 343
# N + P + + G V F G +++W RD E K++ + + + + +
# Sbjct: 293 NVRVNP-HVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYT--LLEEMAS 349
#
# Query: 344 YVVPAFTGLGAPYWDP-------YARGAIFGLS---RGANRNHIVRATLESIAYQTRDVL 393
# V P G+ + D +A + LS N+ + RA E+ A + L
# Sbjct: 350 RVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNL 409
#
# Query: 394 EAMQSDSGERLQYLRVDGGATNNNFLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXX 453
# + + S L GG + Q AD+ + V PVVKE
# Sbjct: 410 QQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAG 469
#
# Query: 454 FWKDLDELRDK-ARVERTFSPDSDNEK 479
# + + E ++ R ERT +PD + +
# Sbjct: 470 IFSSMAETGERLVRWERTHTPDPEKHE 496
#
#
# >bla_ygcE gi:1789138 2899693..2901171
# Length = 492
#
# Score = 83.1 bits (202), Expect = 3e-16
# Identities = 113/511 (22%), Positives = 191/511 (37%), Gaps = 71/511 (13%)
#
# Query: 4 KKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIY-PRAGWVEHNPMEIWATQSSTLN 62
# KKYII +D G+ S++ V+ D NVV + ++ P A EH ++WA+ +
# Sbjct: 3 KKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGH 62
#
# Query: 63 EVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHE 122
# +++++ ++I IG+ + R + K+ GTP I WQ R + D
# Sbjct: 63 DLMSQFAGNKEDIVGIGLGSIRCCRALL-KADGTPAAPLISWQDARVTRPYEHTNPD--V 119
#
# Query: 123 EYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVT 182
# Y+ + +G Y + DN+ FG W V
# Sbjct: 120 AYVTSFSG-----YLTHRLTGEFKDNIAN----------YFGQ---WPV----------- 150
#
# Query: 183 DYTNASRTMLFNIHTKQW----DDKMLEILNIPRSMLPEVRNSSEIYG----QTNIGGKG 234
# DY K W D +++ NIPR ML +V+ + G Q +
# Sbjct: 151 DY-------------KSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHF 197
#
# Query: 235 GVRIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACN 294
# +PV D+ G + A + GT ++ L KA+ I +
# Sbjct: 198 PAGLPVVCTTSDKPVEALGAGLLDDETAVISLGT--YIALMMNGKALPKDPVAYWPIMSS 255
#
# Query: 295 AKGEPEYALEGSVFIAGA-SIQWLRDEL--KIVHDSFDSEYFAQKVTDSNGVYVVPAFTG 351
# Y EG G ++ WLRD L ++ D+ + + + + V P G
# Sbjct: 256 IPQTLLY--EGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNG 313
#
# Query: 352 LGAPY------WDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQ 405
# L W+PY RG + G + I R+ LES+A ++ + M ++ +
# Sbjct: 314 LMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAK 373
#
# Query: 406 YLRVDGGATNNNFLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRDK- 464
# ++ + GG +N++ MQ AD+ ++ R + + D D
# Sbjct: 374 HVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNM 433
#
# Query: 465 ARVERTFSPDSDNEKRERRYKGWKKAVKRSL 495
# RV+ F P N K RY K + + L
# Sbjct: 434 VRVKDIFIPIESNAK---RYDAMNKGIFKDL 461
#
#
# >xylK 498
# Length = 498
#
# Score = 80.8 bits (196), Expect = 1e-15
# Identities = 110/504 (21%), Positives = 204/504 (39%), Gaps = 49/504 (9%)
#
# Query: 5 KYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNEV 64
# +Y + LD G + +A L D + + + P+ GW E + E+W + + +
# Sbjct: 3 QYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRAL 62
#
# Query: 65 VAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEY 124
# + +G++ ++I IGI+ Q + + +K+ P+ NAI+ RR +I + + DG E
# Sbjct: 63 LTHSGVSGEQIVGIGISAQGKGLFLLDKN-DKPLGNAILSSDRRAMEIVRRWQEDGIPEK 121
#
# Query: 125 IRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVTDY 184
# + T + + ++W+ ++ A+ G ++ +L W LT V +
# Sbjct: 122 LYPLTRQTLWTGHPVSLLRWLKEH--EPERYAQIGCVMM--THDYLRWCLT--GVKGCEE 175
#
# Query: 185 TNASRTMLFNIHTKQWDDKMLEILNIP--RSMLPEVRNSSEIYGQTN------IGGKGGV 236
# +N S + L+N+ ++D + + L I LP V S+EI G+ G K G
# Sbjct: 176 SNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGT 235
#
# Query: 237 RIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAK 296
# PV G D + LC AG ++ + M G A+TS +T + +
# Sbjct: 236 --PVVGGLFDVVSTA---LC--AG-IEDEFTLNAVM----GTWAVTSG---ITRGLRDGE 280
#
# Query: 297 GEP----EYALEGSVFIAGAS------IQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVV 346
# P Y +G + AS ++W + + ++ A ++ +
# Sbjct: 281 AHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFL 340
#
# Query: 347 PAFTGLGAPYWDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQY 406
# P G A +G+ R H+++A E + + L M+ + +
# Sbjct: 341 PFLYGSNAGL---EMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTD-VHT 396
#
# Query: 407 LRVDGGATNNNFLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDEL-RDKA 465
# LRV GG +++ MQ AD+ + +E P V+E + + E RD
# Sbjct: 397 LRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLR 456
#
# Query: 466 RVERTFSPDSD----NEKRERRYK 485
# RT PD +K+ +RY+
# Sbjct: 457 HPVRTLLPDMTAHQLYQKKYQRYQ 480
#
#
# >fucK 482
# Length = 482
#
# Score = 76.5 bits (185), Expect = 3e-14
# Identities = 93/442 (21%), Positives = 173/442 (39%), Gaps = 37/442 (8%)
#
# Query: 4 KKYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWV--EHNPMEIWATQSSTL 61
# ++ I+ LD G T+ RA+ ++ +V A P A + E+N W+ +
# Sbjct: 13 QEVILVLDCGATNVRAIAVNRQGKIVARAST------PNASDIAMENNTWHQWSLDAILQ 66
#
# Query: 62 NEVVAKAGITSD----EIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLK 117
# I S+ I I +T + +K G +Y I W+C RTA + D ++
# Sbjct: 67 RFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQ-GNLLYPIISWKCPRTAAVMDNIE 125
#
# Query: 118 ADGHEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQG 177
# + ++ +G+ + + K+ W+ +N E+A + ++ L + T
# Sbjct: 126 RLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISSLINHRLTGEFT-- 183
#
# Query: 178 RVHVTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYG--QTNIGGKGG 235
# TD T A + + +I + + ++L+ IPR + P + + E G Q + G
# Sbjct: 184 ----TDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLG 239
#
# Query: 236 --VRIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAI-TSKNGLLTTIA 292
# V IPV D Q AL+G A Q + +G + +L + + TS
# Sbjct: 240 LPVGIPVISAGHDTQFALFG---AGAEQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGST 296
#
# Query: 293 CNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDS--EYFAQKVTDSNGVYVVPAFT 350
# C + G ++A ++W+R + E ++GV +
# Sbjct: 297 CELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAPGADGVKMQCDLL 356
#
# Query: 351 GLGAPYWDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVD 410
# W G++ R H RA LE + Q + L+ ++ + L +
# Sbjct: 357 SCQNAGWQ--------GVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKASELLLV 408
#
# Query: 411 GGATNNNFLMQFQADILDVNVE 432
# GG + N Q +A++LD+ V+
# Sbjct: 409 GGGSRNTLWNQIKANMLDIPVK 430
#
#
# >HIN0525 xylB 576173..577708
# Length = 511
#
# Score = 70.6 bits (170), Expect = 2e-12
# Identities = 94/441 (21%), Positives = 177/441 (39%), Gaps = 34/441 (7%)
#
# Query: 8 IALDQGTTSSRAVLLDH-NANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNEVVA 66
# I +D GT ++A++LD V+ + + I G E P W ++
# Sbjct: 21 IGIDCGTQGTKAIVLDSVQKKVIGVGYAKHELITQSNGRREQQP-NWWIEALQQALQIAL 79
#
# Query: 67 KAGITSDE-----IAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKL-KADG 120
# K S + IGI+ Q+ ++ +K+ P+Y A +W TA D L + G
# Sbjct: 80 KQAKNSPHFSPNLVKGIGISGQQHGLVMLDKND-RPLYKAKLWCDTETATENDILIEKLG 138
#
# Query: 121 HEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVH 180
# + + G++ ++ +K+ W N + L ++ WL K
# Sbjct: 139 GQTAVFEKLGIICQTGYTASKLSWFRQNYPDKFANIRKIMLPHDYLNYWLTGKFC----- 193
#
# Query: 181 VTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSM---LPEVRNSSEIYG------QTNIG 231
# T++ +AS + F++ ++W ++ + L +M LP++ ++ + G T G
# Sbjct: 194 -TEFGDASGSGYFDVVKREWKREVFKYLAPELNMDEVLPKLLSAEQKIGVIKPEIATLFG 252
#
# Query: 232 GKGGVRIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTI 291
# V + G GD G + G A + GT + +T + +
# Sbjct: 253 FNENVIVSTGG--GDNMMGAIGTGNIREGIATMSLGTSGTLYAYTQKPLLNLPPMIANFC 310
#
# Query: 292 ACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTG 351
# + N P V +S + L + L I + + + Q +NG+ ++P F G
# Sbjct: 311 SSNNGWLPLVC----VMNITSSNKQLMNLLNIDIEELN-QLAQQAPIGANGITILPFFNG 365
#
# Query: 352 LGAPYWDPYARGAIFGL-SRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVD 410
# P P + +I GL S R ++ RA +ES + R L+ + +G + +R+
# Sbjct: 366 ERVPPL-PNTKASILGLDSSNFTRENLCRAMMESATFTLRYGLDLFRQ-AGLKTSQIRLI 423
#
# Query: 411 GGATNNNFLMQFQADILDVNV 431
# GG ++F Q AD+++ V
# Sbjct: 424 GGGAKSSFWRQMIADVMNSEV 444
#
#
# >HIN0443 xylK complement(488617..490074)
# Length = 485
#
# Score = 68.7 bits (165), Expect = 6e-12
# Identities = 86/442 (19%), Positives = 177/442 (39%), Gaps = 26/442 (5%)
#
# Query: 6 YIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNEVV 65
# Y + +D G T +A + D N + IA+R I + G+ E + E+W + + + +
# Sbjct: 3 YYLGIDCGGTFIKAAIFDQNGTLQSIARRNIPIISEKPGYAERDMDELWNLCAQVIQKTI 62
#
# Query: 66 AKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEYI 125
# ++ I +I AIGI+ Q + +K P+ AI+ +R +I ++ E +
# Sbjct: 63 RQSSILPQQIKAIGISAQGKGAFFLDKD-NKPLGRAILSSDQRAYEI---VQCWQKENIL 118
#
# Query: 126 RNTTGLVVDPYFSGTKV---KWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVT 182
# + + + + G V +WI +N E+ + + L KL
# Sbjct: 119 QKFYPITLQTLWMGHPVSILRWIKENEPSRYEQIHTILMSHDYLRFCLTEKL------YC 172
#
# Query: 183 DYTNASRTMLFNIHTKQWDDKMLEILNIPRSM--LPEVRNSSEI--YGQTNIGGKGGV-- 236
# + TN S + +N+ ++D ++ ++ I + LP + S++I Y + + G+
# Sbjct: 173 EETNISESNFYNMREGKYDIQLAKLFGITECIDKLPPIIKSNKIAGYVTSRAAEQSGLVE 232
#
# Query: 237 RIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAK 296
# IPV G D + LC ++ + +G N + +
# Sbjct: 233 GIPVVGGLFDVVSTA---LCADLKDDQHLNVVLGTWSVVSGVTHYIDDNQTIPFVYGKYP 289
#
# Query: 297 GEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPY 356
# + ++ + + + +++W ++ + + + A+ S+ V P G A
# Sbjct: 290 EKNKFIIHEASPTSAGNLEWFVNQFNLPNYDDINHEIAKLKPASSSVLFAPFLYGSNAKL 349
#
# Query: 357 WDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNN 416
# + +G+ + H+++A E + + LE MQ +RV GG +
# Sbjct: 350 G---MQAGFYGIQSHHTQIHLLQAIYEGVIFSLMSHLERMQV-RFPNASTVRVTGGPAKS 405
#
# Query: 417 NFLMQFQADILDVNVERPVVKE 438
# MQ ADI + +E P ++E
# Sbjct: 406 EVWMQMLADISGMRLEIPNIEE 427
#
#
# >HIN0031 fucK complement(40812..42224)
# Length = 470
#
# Score = 65.2 bits (156), Expect = 7e-11
# Identities = 86/400 (21%), Positives = 164/400 (40%), Gaps = 42/400 (10%)
#
# Query: 52 EIWATQSS----TLNEVVAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCR 107
# EIW +S TLN+++ + GI +I I +T ++++ +Y I W+C
# Sbjct: 51 EIWQKLTSCATQTLNQLMQQ-GIDLKDIVGISVTTFGVDGAPFDEND-QQLYPIISWKCP 108
#
# Query: 108 RTADITDKLKADGHEEYIRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVD 167
# RT + + L + + G+ + + K+ W+ + +K + F +
# Sbjct: 109 RTIPVMENLSNQLDIKSLYQRNGIGQYSFNTLFKLHWLKTHKPDVFQKMAK----FVFIS 164
#
# Query: 168 TWLVWKLTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYG- 226
# + L +LT TD+T A +M+ N+ + WD +L L + + P +R + E G
# Sbjct: 165 SMLTQRLTGQ--FTTDHTMAGTSMMTNLTSGNWDPSILASLGLSNNHFPPMRYAGEKVGK 222
#
# Query: 227 -QTNIGGKGGVR-IPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLL-----HTGNK 279
# +T + K G+ +PV D Q A++G AG + +G + +L H +
# Sbjct: 223 LRTPLAQKWGLNPVPVISCGHDTQFAVFGS---GAGLNQPVLSSGTWEILMARTQHAEPR 279
#
# Query: 280 AITSKNGLLTTIACNAKGEPEYALEGSVF------IAGASIQWLRDELKIVHDSFDSE-Y 332
# GL T E+ + + F + I+WL L D + S+ Y
# Sbjct: 280 FEFVSQGLTT----------EFDAQSNCFNPAVQWVGSGVIEWLGKLL--FSDVYGSDHY 327
#
# Query: 333 FAQKVTDSNGVYVVPAFTGLGAPYWDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDV 392
# + + + + + +G I GLS A R I + L+ +A + ++
# Sbjct: 328 YTTMIKEGEKAFNAGKRAVNFEGIFSQLGQGNISGLSMFATRGEIYVSALQHMANKLKNG 387
#
# Query: 393 LEAMQSDSGERLQYLRVDGGATNNNFLMQFQADILDVNVE 432
# L + S + + L GG + N Q +A+ L++ ++
# Sbjct: 388 LSVLHQVSQFQAKSLICVGGGSKNVLWNQIRANTLNLPID 427
#
#
# >ygcE 374
# Length = 374
#
# Score = 62.8 bits (150), Expect = 4e-10
# Identities = 70/316 (22%), Positives = 119/316 (37%), Gaps = 25/316 (7%)
#
# Query: 198 KQW----DDKMLEILNIPRSMLPEVRNSSEIYG----QTNIGGKGGVRIPVAGIAGDQQA 249
# K W D +++ NIPR ML +V+ + G Q + +PV D+
# Sbjct: 35 KSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPV 94
#
# Query: 250 ALYGHLCVHAGQAKNTYGTGCFMLLHTGNKAITSKNGLLTTIACNAKGEPEYALEGSVFI 309
# G + A + GT ++ L KA+ I + Y EG
# Sbjct: 95 EALGAGLLDDETAVISLGT--YIALMMNGKALPKDPVAYWPIMSSIPQTLLY--EGYGIR 150
#
# Query: 310 AGA-SIQWLRDEL--KIVHDSFDSEYFAQKVTDSNGVYVVPAFTGLGAPY------WDPY 360
# G ++ WLRD L ++ D+ + + + + V P GL W+PY
# Sbjct: 151 KGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPY 210
#
# Query: 361 ARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFLM 420
# RG + G + I R+ LES+A ++ + M ++ +++ + GG +N++ M
# Sbjct: 211 KRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFM 270
#
# Query: 421 QFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRDK-ARVERTFSPDSDNEK 479
# Q AD+ ++ R + + D D RV+ F P N K
# Sbjct: 271 QIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAK 330
#
# Query: 480 RERRYKGWKKAVKRSL 495
# RY K + + L
# Sbjct: 331 ---RYDAMNKGIFKDL 343
#
#
# >slr1420 3272165..3273442
# Length = 425
#
# Score = 34.4 bits (77), Expect = 0.13
# Identities = 47/198 (23%), Positives = 78/198 (38%), Gaps = 23/198 (11%)
#
# Query: 5 KYIIALDQGTTSSRAVLLDHNANVVEIAQREFTQIYPRAGWVEHNPMEIWATQSSTLNEV 64
# K + LD GT+ +RA ++D N ++ + +F+Q+ P + + S + +
# Sbjct: 8 KLFLGLDFGTSGARAAVIDQNKELIWQEKVQFSQV--------PGPQLVTIWRESLFHLL 59
#
# Query: 65 VAKAGITSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEY 124
# S +I AI I T ++ + S G + +++ R ++ L A
# Sbjct: 60 DQIPDELSSQIQAIAIDGTSSTVLLLD-SQGNGLMEPLLYNDDRGKEVKHLLSA------ 112
#
# Query: 125 IRNTTGLVVDPYFSGTKVKWILDNVEGAREKAERGELLFGTVDTWLVWKLTQGRVHVTDY 184
# I LV S K+ W E ER D WL L GR V+DY
# Sbjct: 113 IAPADHLVQSATSSLAKLLWYSQQPE-----FERANYFCHQAD-WLASLLHGGR-PVSDY 165
#
# Query: 185 TNASRTMLFNIHTKQWDD 202
# NA + + +N H + D
# Sbjct: 166 HNALK-LGYNPHNLTYPD 182
#
#
# >araB 566
# Length = 566
#
# Score = 33.6 bits (75), Expect = 0.22
# Identities = 32/156 (20%), Positives = 63/156 (39%), Gaps = 8/156 (5%)
#
# Query: 345 VVPAFTGLGAPYWDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERL 404
# V+ F G +P + +G I L+ + + + + A+ R ++E +D G +
# Sbjct: 394 VLDWFNGRRSPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECF-TDQGIAV 452
#
# Query: 405 QYLRVDGG-ATNNNFLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRD 463
# + GG A N +MQ D+L+ ++ + D+ +
# Sbjct: 453 NNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQ 512
#
# Query: 464 K--ARVERTFSPDSDNEKR----ERRYKGWKKAVKR 493
# K + VE+T P S+ +R RRY+ W + ++
# Sbjct: 513 KMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQ 548
#
#
# >yeiO 393
# Length = 393
#
# Score = 33.2 bits (74), Expect = 0.29
# Identities = 25/97 (25%), Positives = 39/97 (39%), Gaps = 11/97 (11%)
#
# Query: 174 LTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGK 233
# L G + +LF I T W L I+N+P ++ E+ ++ G +G
# Sbjct: 203 LATGTIEAPRRNRRDTLLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAG-VMMGTA 261
#
# Query: 234 GGVRIPVAGIAGD----------QQAALYGHLCVHAG 260
# G+ IP IAG + A G +C +AG
# Sbjct: 262 AGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAG 298
#
#
# >bla_araB gi:1786249 complement(68348..70048)
# Length = 566
#
# Score = 32.8 bits (73), Expect = 0.38
# Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 8/156 (5%)
#
# Query: 345 VVPAFTGLGAPYWDPYARGAIFGLSRGANRNHIVRATLESIAYQTRDVLEAMQSDSGERL 404
# V+ F G P + +G I L+ + + + + A+ R ++E +D G +
# Sbjct: 394 VLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECF-TDQGIAV 452
#
# Query: 405 QYLRVDGG-ATNNNFLMQFQADILDVNVERPVVKEVXXXXXXXXXXXXXXFWKDLDELRD 463
# + GG A N +MQ D+L+ ++ + D+ +
# Sbjct: 453 NNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQ 512
#
# Query: 464 K--ARVERTFSPDSDNEKR----ERRYKGWKKAVKR 493
# K + VE+T P S+ +R RRY+ W + ++
# Sbjct: 513 KMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQ 548
#
#
# >rhaB 489
# Length = 489
#
# Score = 31.7 bits (70), Expect = 0.85
# Identities = 18/68 (26%), Positives = 30/68 (43%), Gaps = 2/68 (2%)
#
# Query: 183 DYTNASRTMLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPVAG 242
# +YTNA+ T L NI++ WD+ +L ++ + + G G IPV
# Sbjct: 175 EYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWIC--PQGNEIPVVA 232
#
# Query: 243 IAGDQQAA 250
# +A A+
# Sbjct: 233 VASHDTAS 240
#
#
# Score = 30.9 bits (68), Expect = 1.5
# Identities = 17/55 (30%), Positives = 23/55 (40%)
#
# Query: 377 IVRATLESIAYQTRDVLEAMQSDSGERLQYLRVDGGATNNNFLMQFQADILDVNV 431
# + R +S+A DVL + GE L + GG N L Q AD + V
# Sbjct: 367 LARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRV 421
#
#
# >bla_gltB_3
# Length = 316
#
# Score = 30.9 bits (68), Expect = 1.5
# Identities = 20/92 (21%), Positives = 36/92 (38%), Gaps = 5/92 (5%)
#
# Query: 220 NSSEIYGQTNIGGKGGVRIPVAGIAGDQQAALYGHLCVHAGQAKNTYGTGCFMLLHTGNK 279
# ++++ G+ GG +R PV +A++ G+ C++ Y G G +
# Sbjct: 123 DANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAG-----RAGER 177
#
# Query: 280 AITSKNGLLTTIACNAKGEPEYALEGSVFIAG 311
# +G +T + EY G V I G
# Sbjct: 178 FGVRNSGAITVVEGIGDNGCEYMTGGIVCILG 209
#
#
# >YJR032w CPR7/J1585/YJR032w Cyclophilin, homolog of mammalian
# cyclophilin Cyp40.
# Length = 393
#
# Score = 30.1 bits (66), Expect = 2.5
# Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 19/79 (24%)
#
# Query: 89 VWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEYIRNTTGLVVDPYFSGTKVKWILDN 148
# VWEK+ G P+YNA D++ D +EEY + T D +
# Sbjct: 196 VWEKTMGVPLYNA----------SNDQIGGDVYEEYPDDDTHFGDDDFGKA--------- 236
#
# Query: 149 VEGAREKAERGELLFGTVD 167
# +E A E G LLF D
# Sbjct: 237 LEAANIIKESGTLLFKKKD 255
#
#
# >putP 502
# Length = 502
#
# Score = 29.7 bits (65), Expect = 3.3
# Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
#
# Query: 165 TVDTWLVWKLTQGRVHV-TDYTNASRTMLFNIHTKQWDDK 203
# T+ W+ WKL GR+ V T+Y N + T L + T +++DK
# Sbjct: 83 TLGAWINWKLVAGRLRVHTEYNNNALT-LPDYFTGRFEDK 121
#
#
# >yicK 394
# Length = 394
#
# Score = 29.3 bits (64), Expect = 4.3
# Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
#
# Query: 191 MLFNIHTKQWDDKMLEILNIPRSMLPEVRNSSEIYGQTNIGGKGGVRIPVAGIAG 245
# +LF + + W L ++N+P ++ E+ + ++ G+ IG G+ IP+ IAG
# Sbjct: 221 LLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLTGEM-IGIAAGLEIPMMLIAG 274
#
#
# >slr0018 2488028..2489428
# Length = 466
#
# Score = 29.3 bits (64), Expect = 4.3
# Identities = 13/31 (41%), Positives = 18/31 (57%), Gaps = 5/31 (16%)
#
# Query: 45 WVEHNPMEIWATQSST-----LNEVVAKAGI 70
# W++H P+ IW T S T +NEV+A I
# Sbjct: 86 WLDHFPLRIWQTGSGTQTNMNVNEVIANRAI 116
#
#
# >tehA 330
# Length = 330
#
# Score = 29.0 bits (63), Expect = 5.6
# Identities = 20/73 (27%), Positives = 28/73 (37%), Gaps = 3/73 (4%)
#
# Query: 282 TSKNGLLTTIACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAQKVTDSN 341
# T N ++ +AC A G Y G VF+ WL E I+ S + S
# Sbjct: 145 TVANNFISAMACGALG---YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSL 201
#
# Query: 342 GVYVVPAFTGLGA 354
# G+ + PA A
# Sbjct: 202 GIQLAPALVACSA 214
#
#
# >HIN0052 tufA 68685..69869
# Length = 394
#
# Score = 29.0 bits (63), Expect = 5.6
# Identities = 30/128 (23%), Positives = 50/128 (38%), Gaps = 12/128 (9%)
#
# Query: 71 TSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEYIRNTTG 130
# T DE+ +GI + +TT+ TG ++ ++ + R +I L+ EE R
# Sbjct: 239 TGDEVEIVGIKDTAKTTV-----TGVEMFRKLLDEGRAGENIGALLRGTKREEIERGQVL 293
#
# Query: 131 L---VVDPYFSGTKVKWILDNVEGARE----KAERGELLFGTVDTWLVWKLTQGRVHVTD 183
# + P+ ++L EG R K R + F T D +L +G V
# Sbjct: 294 AKPGSITPHTDFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMP 353
#
# Query: 184 YTNASRTM 191
# N T+
# Sbjct: 354 GDNIKMTV 361
#
#
# >HIN1699 tufB complement(1823653..1824837)
# Length = 394
#
# Score = 29.0 bits (63), Expect = 5.6
# Identities = 30/128 (23%), Positives = 50/128 (38%), Gaps = 12/128 (9%)
#
# Query: 71 TSDEIAAIGITNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGHEEYIRNTTG 130
# T DE+ +GI + +TT+ TG ++ ++ + R +I L+ EE R
# Sbjct: 239 TGDEVEIVGIKDTAKTTV-----TGVEMFRKLLDEGRAGENIGALLRGTKREEIERGQVL 293
#
# Query: 131 L---VVDPYFSGTKVKWILDNVEGARE----KAERGELLFGTVDTWLVWKLTQGRVHVTD 183
# + P+ ++L EG R K R + F T D +L +G V
# Sbjct: 294 AKPGSITPHTDFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMP 353
#
# Query: 184 YTNASRTM 191
# N T+
# Sbjct: 354 GDNIKMTV 361
#
#
# >MP622 complement(763192..765618)
# Length = 808
#
# Score = 28.6 bits (62), Expect = 7.4
# Identities = 46/190 (24%), Positives = 78/190 (40%), Gaps = 19/190 (10%)
#
# Query: 155 KAERGELLFGTVDT-WLVWKLTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLEILNIPRS 213
# + +R + +FGT + WL R+H T T NI + L+ NIP
# Sbjct: 401 RKDRADSVFGTPNIKWLAVVKEVKRIHETGRPILIGTA--NIDDSELLHNYLQEANIPHE 458
#
# Query: 214 MLPEVRNSSEIYGQTNIGGKGGVRIP--VAGIAGDQQAALYGHLCVHAGQAKNTYGTGCF 271
# +L +S E G KG V I +AG D + G+ G G +
# Sbjct: 459 VLNAKNHSREAEIVAKAGQKGAVTISTNMAGRGTD----------IRLGEGVAEMG-GLY 507
#
# Query: 272 MLLHTGNKAITSKNGLLTTIACNA-KGEPEY--ALEGSVFIAGASIQWLRDELKIVHDSF 328
# +L N++ N L +GE ++ +L ++F A + R K+ +D+F
# Sbjct: 508 VLGTERNESRRIDNQLRGRAGRQGDRGETKFFISLGDALFKRFAHDRIERAITKLGNDTF 567
#
# Query: 329 DSEYFAQKVT 338
# DS +F++ ++
# Sbjct: 568 DSSFFSKMLS 577
#
#
# >HIN1157 ygjE complement(1248380..1249819)
# Length = 479
#
# Score = 28.2 bits (61), Expect = 9.7
# Identities = 21/62 (33%), Positives = 29/62 (45%), Gaps = 17/62 (27%)
#
# Query: 124 YIRNTTGLVVDPY-----------FSGTKVKWILDNVEGAREKAERGELLFG--TVDTWL 170
# YI GLV+ PY SG I+ N EGA+E + G +L G + TWL
# Sbjct: 39 YIATIVGLVLKPYGEPVILLAAIAVSGV----IIGNTEGAKELVKVGNMLDGYKSGTTWL 94
#
# Query: 171 VW 172
# ++
# Sbjct: 95 IF 96
#
#
# >HP0476 glutamyl-tRNA synthetase (gltX) {Escherichia coli}
# Length = 463
#
# Score = 28.2 bits (61), Expect = 9.7
# Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
#
# Query: 81 TNQRETTIVWEKSTGTPVYNAIVWQCRRTADITDKLKADGH 121
# TN+ + I+ +S GTP YN +V ITD ++ D H
# Sbjct: 165 TNELDDFII-ARSDGTPTYNFVVTIDDALMGITDVIRGDDH 204
#
#
# >MJ0956
# Length = 260
#
# Score = 28.2 bits (61), Expect = 9.7
# Identities = 13/49 (26%), Positives = 26/49 (52%)
#
# Query: 284 KNGLLTTIACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEY 332
# KN +L +G+ + E FI+ S +W+R+E+K + + D ++
# Sbjct: 24 KNRVLLGYLLKLRGKYNFDFEAVTFISDRSPKWVREEIKWIMKANDVKH 72
#
#
Database: dixu
Posted date: Oct 19, 1998 12:58 PM
Number of letters in database: 7,470,131
Number of sequences in database: 20,772
Lambda K H
0.317 0.133 0.399
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7170595
Number of Sequences: 20772
Number of extensions: 293950
Number of successful extensions: 767
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 42
length of query: 503
length of database: 7,470,131
effective HSP length: 49
effective length of query: 454
effective length of database: 6,452,303
effective search space: 2929345562
effective search space used: 2929345562
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 61 (28.2 bits)
S2: 61 (28.2 bits)