Archaeoglobus fulgidus Genome
Sequence Search
>Query : 595 aa
vs library
using protein matrix
663321 residues in 2409 sequences
statistics exclude scores greater than 74
mean initn score: 31.8 (8.93)
mean init1 score: 30.3 (6.39)
2409 scores better than 1 saved, ktup: 2, variable pamfact
joining threshold: 29
The best scores are: initn init1 opt
AF0768 translation initiation factor aIF-2 (infB) {Met 2826 2826 2826
AF0937 translation elongation factor EF-1, subunit alp 115 82 111
AF1894 translation elongation factor EF-2 (fus) {Pyroc 109 82 100
AF0744 translation elongation factor TU, putative {Eug 101 50 90
AF1409 modification methylase, type III R/M system {En 89 40 42
AF1300 ABC transporter, ATP-binding protein {Streptomy 76 64 68
AF0053 conserved hypothetical protein {Synechocystis s 75 63 78
AF1117 DNA-directed RNA polymerase, subunit E' (rpoE1) 75 57 58
AF2090-N conserved hypothetical protein {Methanococcus 75 44 74
AF0477 AAA superfamily ATPase {Homo sapiens} 74 46 46
AF1274 carbamoyl-phosphate synthase, large (or ammonia 73 44 63
AF0262 medium-chain acyl-CoA ligase (alkK-2) {Pseudomo 73 55 63
AF0017 3-hydroxyacyl-CoA dehydrogenase (hbd-1) {Clostr 72 45 57
AF1822 serine/threonine phosphatase (ppa) {Sulfolobus 71 40 45
AF1469 ABC transporter, ATP-binding protein {Methanoco 70 44 52
AF0394 D-lactate dehydrogenase, cytochrome-type (dld) 69 47 47
AF2424 conserved hypothetical protein {Synechocystis P 68 35 44
AF0473 cation-transporting ATPase, P-type (pacS) {Syne 68 38 50
AF1355 hypothetical protein 66 54 54
AF1420 membrane protein {Methanococcus jannaschii} 65 51 64
AF0208 signal-transducing histidine kinase {Synechocys 65 53 63
AF0592 translation initiation factor aIF-2, subunit ga 64 47 108
AF1483 signal-transducing histidine kinase {Synechocys 64 50 50
AF1324 carbohydrate kinase, FGGY family {Staphylococcu 63 37 50
AF1342 thymidine phosphorylase (deoA-2) {Methanococcus 63 51 55
AF0724 cobalamin biosynthesis precorrin-3 methylase (c 63 40 44
AF0904 succinyl-diaminopimelate desuccinylase, putativ 62 50 50
AF1511 conserved hypothetical protein {Methanococcus j 62 38 79
AF0048 hypothetical protein 62 62 82
AF0181 conserved hypothetical protein {Methanococcus j 62 43 56
AF0119 conserved hypothetical protein {Methanococcus j 62 50 56
AF0912 hypothetical protein 62 36 45
AF0946 hypothetical protein 61 42 42
AF0242 glucose-1-phosphate thymidylyltransferase (graD 61 46 65
AF1620 signal-transducing histidine kinase, putative { 61 51 93
AF1516 sugar fermentation stimulation protein (sfsA) { 61 37 45
AF1139 ABC transporter, ATP-binding protein {Bacillus 61 35 49
AF1471 conserved hypothetical protein {Methanococcus j 60 47 47
AF0403 conserved hypothetical protein {Staphylococcus 60 60 61
AF0955 hypothetical protein 60 42 43
AF0687 long-chain-fatty-acid--CoA ligase (fadD-3) {Esc 60 50 55
AF1449 pyruvate formate-lyase 2 (pflD) {Escherichia co 60 34 56
AF0755 heterodisulfide reductase, subunits E and D, pu 60 49 51
AF1899 conserved hypothetical protein {Methanococcus j 59 40 90
AF0887 ribose ABC transporter, ATP-binding protein (rb 59 35 68
AF1306 conserved hypothetical protein {Synechocystis P 59 40 42
AF0958 branched-chain amino acid ABC transporter, ATP- 58 48 48
AF0494 conserved hypothetical protein {Saccharomyces c 58 47 52
AF1437 hypothetical protein 58 35 43
AF0176 molybdopterin oxidoreductase, molybdopterin bin 58 33 43
AF0768 translation initiation factor aIF-2 (infB) {Methanococcus jannaschii}
100.0% identity in 595 aa overlap
10 20 30 40 50 60
Query MSKKKEEAKALRTPIVAVLGHVDHGKTTLLDRIRKSKVVAKEAGGITQHIGATEVPLDVI
X:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 MSKKKEEAKALRTPIVAVLGHVDHGKTTLLDRIRKSKVVAKEAGGITQHIGATEVPLDVI
10 20 30 40 50 60
70 80 90 100 110 120
Query KQICKDIWKVEVKIPGLLFIDTPGHKAFTNLRRRGGALADLAILIVDINEGFKPQTEEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 KQICKDIWKVEVKIPGLLFIDTPGHKAFTNLRRRGGALADLAILIVDINEGFKPQTEEAL
70 80 90 100 110 120
130 140 150 160 170 180
Query SILRTFKTPFVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAKQNLENRLYNLIAELYQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 SILRTFKTPFVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAKQNLENRLYNLIAELYQR
130 140 150 160 170 180
190 200 210 220 230 240
Query GFSAERFDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 GFSAERFDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGT
190 200 210 220 230 240
250 260 270 280 290 300
Query VLEVKEERGLGVTCDAILYDGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 VLEVKEERGLGVTCDAILYDGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKF
250 260 270 280 290 300
310 320 330 340 350 360
Query QSVKSVTAAAGIKIVAPNLENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 QSVKSVTAAAGIKIVAPNLENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGV
310 320 330 340 350 360
370 380 390 400 410 420
Query VLKTDTLGSLEALINELRQEGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNVKLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 VLKTDTLGSLEALINELRQEGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNVKLLP
370 380 390 400 410 420
430 440 450 460 470 480
Query GVEEEAKKYGVRIFSHEIIYTLIESFVKWREEERLARERQKVEALIKPGKIKLLKEFIFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 GVEEEAKKYGVRIFSHEIIYTLIESFVKWREEERLARERQKVEALIKPGKIKLLKEFIFR
430 440 450 460 470 480
490 500 510 520 530 540
Query RSKPAIVGVRVLAGELRRGVDLIKPDGTKVGAVRTMQKEGKNVAIASAGDELAIAIEDVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
AF0768 RSKPAIVGVRVLAGELRRGVDLIKPDGTKVGAVRTMQKEGKNVAIASAGDELAIAIEDVT
490 500 510 520 530 540
550 560 570 580 590
Query IGRQLEGDEELYVDVPERHAKVIERDLLDSLDEETKRAFKEFLEIKRKDNPFWGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::X
AF0768 IGRQLEGDEELYVDVPERHAKVIERDLLDSLDEETKRAFKEFLEIKRKDNPFWGK
550 560 570 580 590
AF0937 translation elongation factor EF-1, subunit alpha (tuf) {Methanococcus j
annaschii}
28.9% identity in 142 aa overlap
10 20 30 40 50
Query MSKKKEEAKALRTPIVAVLGHVDHGKTTLLDRI-----RKSKVVAKEAGGITQHIGATEV
:: .:::::::.::..:. .. . .. .:. : ..
AF0937 MAKEKEHINVAFIGHVDHGKSTLIGRLLYETGEIPEHIIEKMRKEAQEKGKATF
10 20 30 40 50
60 70 80 90 100
Query PLDVIKQICKDIWKVEVKIPG-----------LLFIDTPGHKAFTNLRRRGGALADLAIL
.. ... :. .. .:.: . ..: X::..:.. . :.. :: :.:
AF0937 EFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVL
60 70 80 90 100 110
110 120 130 140 150 160
Query IVDINEGFKPQTEEALSILRTF-KTPFVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAK
..:. : .::: : . . :X. ....:: ::.::.
AF0937 VMDVVEKVQPQTREHIFLARTLGINQIIVAINKMDRVNYDQKEYEAAKEAVSKLLKMVGY
120 130 140 150 160 170
170 180 190 200 210 220
Query QNLENRLYNLIAELYQRGFSAERFDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQR
AF0937 KVDEIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYS
180 190 200 210 220 230
AF1894 translation elongation factor EF-2 (fus) {Pyrococcus woesei}
28.5% identity in 130 aa overlap
10 20 30 40
Query MSKKKEEAKALRTPIVAVLGHVDHGKTTLLDRIRKSKVVAKEAGGITQ-----
.....:.::::::: :.. . . .:. . :
AF1894 MARAKKVDKIKELMWKPKFIRNIGIVAHIDHGKTTLSDNLLAGAGMISEELAGQQLYLDF
10 20 30 40 50 60
50 60 70 80 90 100
Query HIGATEVPLDVIKQICKDIWKVEVKIPGLLFIDTPGHKAFTNLRRRGGALADLAILIVDI
. . : ... . . . . : . . .X::::: .:.. :. .: .:..::
AF1894 DEQEQERGITINAANVSMVHEYEGQDYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDA
70 80 90 100 110 120
110 120 130 140 150 160
Query NEGFKPQTEEALSILRTFKTPFVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAKQNLEN
:: .::::..:. . .. :. .::.:X.
AF1894 VEGVMPQTETVLRQALKENVKPVLFVNKVDRLIKELELTPQQMQERLIKVITEVNKLIKA
130 140 150 160 170 180
170 180 190 200 210 220
Query RLYNLIAELYQRGFSAERFDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQRYLEKN
AF1894 MRPDKYSEWKIDVANGSAAFGSALYNWAVSVPSQKKTGIGFKEVYEHIKEGKVKELAKKS
190 200 210 220 230 240
AF0744 translation elongation factor TU, putative {Euglena gracilis}
34.4% identity in 64 aa overlap
50 60 70 80 90 100
Query HIGATEVPLDVIKQICKDIWKVEVKIPGLLFIDTPGHKAFTNLRRRG--GALADLAILIV
:.:: ::... . :: :. .: ..:.:
AF0744 YKDGKVLRMKNPLSKAEKAMVVETADKLVSFVDTVGHEPWLRTTIRGLLGQKVDYGLLVV
220 230 240 250 260 270
110 120 130 140 150 160
Query DINEGFKPQTEEALSILRTFKTPFVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAKQNL
. :.: .. :.: :.:. ... : .::..: :..
AF0744 AANDGVMRTTKEHLGIMLAMDLPVIVAVTKADMVDDARLSEVLQEISATLRRVGRVPTVL
280 290 300 310 320 330
170 180 190 200 210 220
Query ENRLYNLIAELYQRGFSAERFDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQRYLE
AF0744 KSRHDARKAAEMVKSNKLLVPVVITSAVTLEGYDILEEIFLHLPKRYTADEDFLMYIDKI
340 350 360 370 380 390
AF1409 modification methylase, type III R/M system {Enterobacter cloacae}
36.4% identity in 22 aa overlap
300 310 320 330 340 350
Query ESKFQSVKSVTAAAGIKIVAPNLENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTD
.: :::.::. ..... :: .
AF1409 LLYWANKDQYYVKTTECFGRYTFRVKELTVNFRVVEAEEEKGNIKSPERKFFVLSEKIAD
110 120 130 140 150 160
360 370 380 390 400 410
Query EEGVVLKTDTLGSLEALINELRQEGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNV
AF1409 FDEERRELNIYFEYRGLTEEEEKRFKRITQDRINEETVRILQRKIPEKSLARLIFEKDPN
170 180 190 200 210 220
AF1300 ABC transporter, ATP-binding protein {Streptomyces argillaceus}
22.7% identity in 75 aa overlap
200 210 220 230 240 250
Query AVVPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGTVLEVKEERGLGVTCDAI
X: ... : : .: .:::...... ..
AF1300 DLSTGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQMILRIKEEKDVTIVLTTH
140 150 160 170 180 190
260 270 280 290 300 310
Query LYDGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKFQSVKSVTAAAGIKIVAP
.. .. ::::. ........... :X . .. :: :...
AF1300 NMREAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMSERVILKLKGNAKKLHIPYPYRMDG
200 210 220 230 240 250
320 330 340 350 360 370
Query NLENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKTDTLGSLEALINEL
AF1300 NTLIAFVEDAEKALPSIVVRLAEQGVFVESAKMEEITLEDVFIELAEGS
260 270 280 290 300
AF0053 conserved hypothetical protein {Synechocystis sp.}
15.4% identity in 91 aa overlap
40 50 60 70 80 90
Query VVAKEAGGITQHIGATEVPLDVIKQICKDIWKVEVKIPGLLFIDTPGHKAFTNLRRRGGA
X:.....: .. . : . . .:.::
AF0053 MFSLAIMFVLGSHEMGHYFAARRWKMKTSLPYFIPFPTIIGTLGAVIRHRGVI
10 20 30 40 50
100 110 120 130 140 150
Query LADLAILIVDINEGFKPQTEEALSILRTFKTPFVVAANKIDRIPGWQSHEDTPFMKSYAM
. :.. :.... .. ..... .: ... :X .... . : . . ... ....:..
AF0053 PSRKALFDVGVSGPITGIIASVIVVLIGLQLPFELTSEPTIYIGTPPIFDAILYLTNYQK
60 70 80 90 100 110
160 170 180 190 200 210
Query QEDFAKQNLENRLYNLIAELYQRGFSAERFDRISDFTRTVAVVPISALKGEGIPELLLIL
..
AF0053 EAIHPVAFAGWVGFFVTFLNMIPVGQLDGGHVLRAMLGEASEKISRVVPFLLFAYGFFLM
120 130 140 150 160 170
AF1117 DNA-directed RNA polymerase, subunit E' (rpoE1) {Methanococcus jannaschi
i}
47.6% identity in 21 aa overlap
510 520 530 540 550 560
Query PDGTKVGAVRTMQKEGKNVAIASAGDELAIAIEDVTIGRQLEGDEELYVDVPERHAKVIE
.X:... :: .:::...: :X
AF1117 EDIEKVINSLLWEQFEGRLDREYGMIIGIESIEEIGEGRIIEGDGGVYFDVVFNAICFRP
20 30 40 50 60 70
570 580 590
Query RDLLDSLDEETKRAFKEFLEIKRKDNPFWGK
AF1117 LHQEVVEGEVIEIVEFGAFVSIGPFDALLHMSQVTDDYMVFDEKNKRLVGRETKKVLQEG
80 90 100 110 120 130
AF2090-N conserved hypothetical protein {Methanococcus jannaschii}
18.9% identity in 132 aa overlap
200 210 220 230 240 250
Query VPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGTVLEVKEERGLGVTCDAILY
. .....:. ..: :....... :...:
AF2090 SFNGSAVAGTIKWHFVKPDYVYYKAGKEEGKAKVADDGSFEILLKKAAKEVELRCGNVL-
500 510 520 530 540 550
260 270 280 290 300 310
Query DGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKFQSVKSVTAAAGIKIVAPNL
..::. . . ..:.:... . . : ..::. ... . .:.:
AF2090 -KIVKVTPKPPKEEKGEIVAFDPVKKVIVIKKLEEEQDGKFKIASTEERKKKVKLV----
560 570 580 590 600 610
320 330 340 350 360 370
Query ENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKTDTLGSLEALINELRQ
:.X: ..::.::::. .:: .. ....X
AF2090 -------ELEVPATEENIKKFNLTPDVLSTEIKTKRVKKDMIRLEVNNKLETWYRFSVEI
620 630 640 650 660
380 390 400 410 420 430
Query EGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNVKLLPGVEEEAKKYGVRIFSHEII
AF2090 PEGYRVKGIIGDDGRRIVNTVHVNRSTGELEGDLRWYVKNNTLYFYDDPIWGYDISLYPP
670 680 690 700 710 720
AF0477 AAA superfamily ATPase {Homo sapiens}
32.1% identity in 28 aa overlap
400 410 420 430 440 450
Query VDKRDVVDASANKDELNKVVLAFNVKLLPGVEEEAKKYGVRIFSHEIIYTLIESFVKWRE
X:... ... ::.. : : .. ::X
AF0477 KEIRKLLYNKGGIKRPVVIREDTVMRYAGKVEQKPPFVDLNSFSRQYILTSFDLAVKWFA
30 40 50 60 70 80
460 470 480 490 500 510
Query EERLARERQKVEALIKPGKIKLLKEFIFRRSKPAIVGVRVLAGELRRGVDLIKPDGTKVG
AF0477 SRGVELIKKNPALAYFYQNYDSLDVSYEEAKKANLPKHGDKEWLKGLIEELEKKDETREM
90 100 110 120 130 140
AF1274 carbamoyl-phosphate synthase, large (or ammonia) subunit (carB) {Synecho
cystis PCC6803}
15.1% identity in 324 aa overlap
190 200 210 220 230 240
Query ERFDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGTVLEV
....: .. .... .. .:. ..:
AF1274 MPKREDIRKIMVIGSGPIVIGQAAEFDYSGSQACKALRE
10 20 30
250 260 270 280 290 300
Query KEERGLGVTCDAILYDGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKFQSVK
.. . :.... .. ...::. :. :. ::... . .: .. . :..
AF1274 EGYEVVLVNSNPATIMTDPEMADRVYIEPLDAEIVAKIIERETPDALLPTLGG---QTAL
40 50 60 70 80 90
310 320 330 340 350 360
Query SVTAAAGIKIVAPNLENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKT
..... . . : . . : :..X:.....:: . :.: .:X ... :.
AF1274 NLAVQLTEMGVLDKYGVELIGAKFEAIKKAEDRELFKEAMRKIGLDVP----------KS
100 110 120 130 140
370 380 390 400 410 420
Query DTLGSLEALINELRQEGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNVKLLPGVEE
:. .... .. . : :. . ... . : .... . . ....... :
AF1274 DVAHDVSEALAIADEIGYPVVVRPAFTLGGTGGGIAYNREELREIAERGIKMSMINQVLI
150 160 170 180 190 200
430 440 450 460 470 480
Query EAKKYGVRIFSHEIIYTLIESFVKWREEERLARERQKVEALIKPGKIKLLKEFIFRRSKP
:. : . :. :.. .: .. : . :.... .... :. . . :.. .. .
AF1274 EEGVLGWKEFELEVMRDLADNVVIICSIENFDPMGVHTGDSITVAPAQTLTDVEYQYLRD
210 220 230 240 250 260
490 500 510 520 530 540
Query AIVGVRVLAGELRRGVDL---IKPDGTKVGAVRTMQKEGKNVAIASAGDELAIAIEDVTI
: . . : : .. ..:....: :. .. ... :.:: .....::
AF1274 AAIKIIREIGVETGGSNIQFAVHPENGRVVAIEMNPRVSRSSALASKATGFPIAKIAAKL
270 280 290 300 310 320
550 560 570 580 590
Query GRQLEGDEELYVDVPERHAKVIERDLLDSLDEETKRAFKEFLEIKRKDNPFWGK
AF1274 AVGYTLDEIPNDITKETPASFEPTIDYVVVKIPRFAFDKFPTANQVLGSQMKSVGEVMAV
330 340 350 360 370 380
AF0262 medium-chain acyl-CoA ligase (alkK-2) {Pseudomonas oleovorans}
23.5% identity in 81 aa overlap
130 140 150 160 170 180
Query FVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAKQNLENRLYNLIAELYQRGFSAERFDR
.:..... .: :: ..:.. .. .: ..:
AF0262 MRFVRGFPSTMMDEYQLNITNILRHAATNFPEREVVSR--NLDGSLFRYSY-GEAYER
10 20 30 40 50
190 200 210 220 230 240
Query ISDFTRTVAVVPISALKGEGIP--------ELLLILVGLAQRYLEKNLRLHIEGKGRGTV
.: ...... . ... . :. X:.. . :... ::.::::X
AF0262 VSRLANVLEELGVDVGDRVGVLSWNTHRFFELFFAIPGIGAVLLEMNLRLHPREIAYVAN
60 70 80 90 100 110
250 260 270 280 290 300
Query LEVKEERGLGVTCDAILYDGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKFQ
AF0262 HSGAKVIFVDESLLPIAEAIAPSIGVEKYVVMTDGETPETKLPEVYSYEELLRKASKDYD
120 130 140 150 160 170
AF0017 3-hydroxyacyl-CoA dehydrogenase (hbd-1) {Clostridium acetobutylicum}
24.1% identity in 54 aa overlap
130 140 150 160 170 180
Query KTPFVVAANKIDRIPGWQSHEDTPFMKSYAMQEDFAKQNLENRLYNLIAELYQRGFSAER
:..::. ... ..: .X::.. ..::
AF0017 AWLIEKGVASAEEIDLAVLHGLNYPRGLLRMADDFGIDSIVKKL----NELYEKYNGEER
320 330 340 350 360 370
190 200 210 220 230 240
Query FDRISDFTRTVAVVPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGTVLEVKE
.. . . . :. .. .::X.
AF0017 YKVNPVLQKMVEEGKLGRTTGEGFYKYGDGNYEFVKVEKEGKVGVLKLNRPRRANALNPT
380 390 400 410 420 430
AF1822 serine/threonine phosphatase (ppa) {Sulfolobus solfataricus}
34.9% identity in 43 aa overlap
200 210 220 230 240 250
Query TVAVVPISALKGEGIPELLLILVGLAQRYLEKNLRLHIEGKGRGTVLEVKEERGLGVTCD
X: ::: .:::^ v.: .. . :: .
AF1822 ALRKIEREIEGLAIFLGDYADRGDYPVECYEKVLRLFLEGK---ALLLRGNHESTGVYPH
40 50 60 70 80 90
260 270 280 290 300 310
Query AILYDGTLKVGDRIAIAGKDEVIVTNVKAILKPPPVREMRVESKFQSVKSVTAAAGIKIV
.. :. : :.:
AF1822 QLPYQLREKFGERGEEVYESLIRMWNKMPLSAIVEGEIWMAHGGVPTKQCRIHAEGISRK
100 110 120 130 140 150
AF1469 ABC transporter, ATP-binding protein {Methanococcus jannaschii}
47.4% identity in 19 aa overlap
10 20 30 40
Query MSKKKEEAKALRTPIVAVLGHVDHGKTTLLDRIRKSKVVAKEAG
.X:..:. . ::.::X..:
AF1469 ELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLNMIGCLDKPTKGEV
10 20 30 40 50 60
50 60 70 80 90 100
Query GITQHIGATEVPLDVIKQICKDIWKVEVKIPGLLFIDTPGHKAFTNLRRRGGALADLAIL
AF1469 IINGVKTSGLSDRELTKLRRDSIGFIFQQYNLIPTLTALENVELPMIFRGVARAERERRA
70 80 90 100 110 120
AF0394 D-lactate dehydrogenase, cytochrome-type (dld) {Kluyveromyces lactis}
53.3% identity in 15 aa overlap
330 340 350 360 370 380
Query EFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKTDTLGSLEALINELRQEGIPIKK
X::.::.:.....:X.
AF0394 SAILKFANEKSIPVFMRGGGTGLSGGAVPTEEGIVLSTEKMTELEVDADNRVAICGAGVT
50 60 70 80 90 100
390 400 410 420 430 440
Query AEVGDVDKRDVVDASANKDELNKVVLAFNVKLLPGVEEEAKKYGVRIFSHEIIYTLIESF
AF0394 LKQLDDAAFRHGLSFPPHPGAETATVGGMIATNAGGVRALKYGTMRNYVLSLEAVLADGR
110 120 130 140 150 160
AF2424 conserved hypothetical protein {Synechocystis PCC6803}
27.3% identity in 11 aa overlap
420 430 440 450 460 470
Query VKLLPGVEEEAKKYGVRIFSHEIIYTLIESFVKWREEERLARERQKVEALIKPGKIKLLK
:..:.....:.
AF2424 PAPEIDVSRVGVPGTDFREIRKYAFGDPVKFINWKATAKLGELMVNEFEREGKKAVWIFL
180 190 200 210 220 230
480 490 500 510 520 530
Query EFIFRRSKPAIVGVRVLAGELRRGVDLIKPDGTKVGAVRTMQKEGKNVAIASAGDELAIA
AF2424 DANSYMLHGDLRRNCFETAVEVAASLSYYFAARGHRVGFYAVGHELLIYPESGRRQFSKI
240 250 260 270 280 290
AF0473 cation-transporting ATPase, P-type (pacS) {Synechocystis PCC6803}
17.8% identity in 101 aa overlap
330 340 350 360 370 380
Query SEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKTDTLGSLEALINELRQEGIPIK
.. ::...... .:: : .: . . : .
AF0473 IELGEPEKVEVIAGEGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR
480 490 500 510 520 530
390 400 410 420 430 440
Query KAEV-GDVDKRDVVDASANKDELNKVVLAFNVKLLPGVEEEAKKYGVRIFSHEIIYTLIE
.. : : .. .:....::. . . ....: ...: .v . . :v.. ... . .
AF0473 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL
540 550 560 570 580 590
450 460 470 480 490 500
Query SFVKWREEERLARERQKVEALIKPGKIKLLKEFIFRRSKPAIVGVRVLAGELRRGVDLIK
. :^ : ..:. ^
AF0473 PHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLR
600 610 620 630 640 650
AF1355 hypothetical protein
40.0% identity in 30 aa overlap
310 320 330 340 350 360
Query SVTAAAGIKIVAPNLENVLAGSEFEVVESEEDIKKFEERVRKEYEEIAIRTDEEGVVLKT
X:...:..:. : ::.:: . . . ::X
AF1355 SEMIETLENIFRRAMVCFFKNDRKIAEEVLEDVEDFTNRILKYYEKIAELEVVQLMNLKT
240 250 260 270 280 290
370 380 390 400 410 420
Query DTLGSLEALINELRQEGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNVKLLPGVEE
AF1355 ILDSVSRVAGYSADIAEVVINKSVY
300 310
AF1420 membrane protein {Methanococcus jannaschii}
18.3% identity in 82 aa overlap
360 370 380 390 400 410
Query EEGVVLKTDTLGSLEALINELRQEGIPIKKAEVGDVDKRDVVDASANKDELNKVVLAFNV
:...... :....... .. :.. X.::
AF1420 VTVKVNAVVYYRVVDPAKAVTEVFDYQYATAQLAQTTLRSIIGQAELDEVLSERD-KLNV
80 90 100 110 120 130
420 430 440 450 460 470
Query KLLPGVEEEAKKYGVRIFSHEIIYTLIESFVKWREEERLARERQKVEALIKPGKIKLLKE
:: . ..::.. .:... . :X . . . ... . . . ::.. . .:...
AF1420 KLQQIIDEETNPWGIKVTAVEIKDVELPEEMRRIMAMQAEAERERRSKIIRAEGEYQAAM
140 150 160 170 180 190
480 490 500 510 520 530
Query FIFRRSKPAIVGVRVLAGELRRGVDLIKPDGTKVGAVRTMQKEGKNVAIASAGDELAIAI
AF1420 KLREAADVLAQSEGAILLRYLQTLNEISAEQNTTIVMPIPVELLKFFVEKAKS
200 210 220 230 240
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