Results for:
>gi|140963|sp|P28321|YKJ4_YEAST HYPOTHETICAL 35.5 KD PROTEIN IN CWP1-MBR1 INTERGENIC REGION., 313 bases, 2221 checksum.
*) Request Your ID-MPsrch: 960815031401-05618
*) Your Mail Body(including Query) is ...
PROGRAM PP
DBASE nrprotein:all
TABLE blosum60
SUMMARY 20
ALIGN 20
MODE E
BEGIN
>
MAPYPYKVQTTVPELQYENFDGAKFGYMFWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLMDHLSLNGYESFTFDQRGA
GVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECKAKGIPLFMWGHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHP
HTMYNKPTQIIAPLLAKFLPRVRIDTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQRGAKLYKNENNYIQ
KNFAKDKPVVIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMKQWLDKHTTTEAK
P
//
MPsrch_pp -run -query /usr2/e_mpsrch/m-todo/960815031401-05618.seq -output /usr2/e_mpsrch/m-todo/960815031401-05618.lis -table blosum60 -gap 14 -summary 20 -align 20 -ANNO NO -mode E -rank SC -dbase nrprotein:all
****************************************************************************
___ ___ _______ _____ ______ _____ _ _
| | \ / / | | ___ | | ___| | __ | | ___| | | | |
| |\ \/ /| | | | | | | | | | | | | | | | | |
| | \_\/ | | | |___| | | |___ | |__| | | | | |___| |
| | | | | _____| |___ | | __| | | | ___ |
| | | | | | | | | |\ \ | | | | | |
| | | | | | ___| | | | \ \ | |___ | | | |
|_| |_| |_| |_____| |_| \_\ |_____| |_| |_| (TM)
****************************************************************************
Release 2.1D John F. Collins, Biocomputing Research Unit.
Copyright (c) 1993, 1994, 1995 University of Edinburgh, U.K.
Distribution rights by IntelliGenetics, Inc.
MPsrch_pp protein - protein database search, using Smith-Waterman algorithm
Run on: Thu Aug 15 03:14:08 1996; MasPar time 23.76 Seconds
777.554 Million cell updates/sec
Tabular output not generated.
Title: >
Description: No description found
Perfect Score: 1649
Sequence: 1 MAPYPYKVQTTVPELQYENF..........TVFNDMKQWLDKHTTTEAKP 313
Scoring table: TABLE blosum60
Gap 14
Searched: 196415 seqs, 59022329 residues
Database: nrprotein
1 part1
2 part2
3 part3
4 part4
Statistics: Mean 28.549; Variance 32.781; scale 0.871
Pred. No. is the number of results predicted by chance to have a
score greater than or equal to the score of the result being printed,
and is derived by analysis of the total score distribution.
SUMMARIES
%
Result Query
No. Score Match Length DB ID Description Pred. No.
---------------------------------------------------------------------------
1 1649 100.0 313 2 SCYJU1G_3 (X66245|gi &SCYJU1G_3 0.00e+00
2 1644 99.7 313 2 S37921(S379 S3909 &SCHAPLAP_17 (X7 0.00e+00
3 72 4.4 617 1 RNU35245_1 (U35245|gid:none ) Rat 3.54e-03
4 70 4.2 509 2 A53920(A539 &CGU11453_1 (U11453|g 1.05e-02
5 68 4.1 933 2 ROTCSP_1 (M91433|gid &ROTCSP_1 3.05e-02
6 67 4.1 44 3 VACH3K_5 (D00382|gid &VACH3K_5 5.17e-02
7 63 3.8 159 2 PBU42580_27 (U42580 &PBU42580_271 4.03e-01
8 62 3.8 268 3 ECXTHA_1 (X13002|gid &ECXTHA_1 6.65e-01
9 62 3.8 247 2 B64147(B641 &HEAHI0282_1 (L44927| 6.65e-01
10 62 3.8 268 2 ECOXTH_1 (M22592|gid &ECOXTH_1 6.65e-01
11 62 3.8 509 1 MMU37799_1 (U37799|g &MMU37799_1 6.65e-01
12 60 3.6 366 3 JC4080(JC40 &ODPB_SCHPO (Q09171) 1.78e+00
13 60 3.6 405 3 CEK04G2_2 (Z75712|gid:none ) Cae 1.78e+00
14 60 3.6 272 2 PFU12537_1 (U12537|g &PFU12537_1 1.78e+00
15 60 3.6 271 1 ESTE_PSEFL (P22862) ARYLESTERASE 1.78e+00
16 60 3.6 314 1 H23701(H237 &OLF9_RAT (P23272) OL 1.78e+00
17 58 3.5 284 3 S51294(S512 S5956 &SCRPD3COS_10 (Z 4.64e+00
18 58 3.5 321 3 STU02497_1 (U02497|g &STU02497_1 4.64e+00
19 58 3.5 306 3 BAU57319_1 (U57319|gid:none ) Bru 4.64e+00
20 58 3.5 255 3 U00014_20 (U00014|gi &U00014_20 4.64e+00
ALIGNMENTS
RESULT 1
>SCYJU1G_3
(X66245|gi &SCYJU1G_3 (X66245|gi &YKJ4_YEAST (P28321)
DB 2; Score 1649; Match 100.0%; QryMatch 100.0%; Pred. No. 0.00e+00;
Matches 313; Conservative 0; Mismatches 0; Indels 0; Gaps 0;
************************************************************
Db 1 MAPYPYKVQTTVPELQYENFDGAKFGYMFWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLM 60
Qy 1 MAPYPYKVQTTVPELQYENFDGAKFGYMFWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLM 60
************************************************************
Db 61 DHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECKAKGIPLFMW 120
Qy 61 DHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECKAKGIPLFMW 120
************************************************************
Db 121 GHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQIIAPLLAKFLPRVRI 180
Qy 121 GHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQIIAPLLAKFLPRVRI 180
************************************************************
Db 181 DTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQRGAKLYKNENNYIQKNFAKD 240
Qy 181 DTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQRGAKLYKNENNYIQKNFAKD 240
************************************************************
Db 241 KPVVIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMK 300
Qy 241 KPVVIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMK 300
*************
Db 301 QWLDKHTTTEAKP 313
Qy 301 QWLDKHTTTEAKP 313
RESULT 2
>S37921(S37921;
S3909 &SCHAPLAP_17 (X71133| &SCHAPLAP_17 (X71133| &SCYKL094W_1
DB 2; Score 1644; Match 99.4%; QryMatch 99.7%; Pred. No. 0.00e+00;
Matches 311; Conservative 2; Mismatches 0; Indels 0; Gaps 0;
************************************************************
Db 1 MAPYPYKVQTTVPELQYENFDGAKFGYMFWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLM 60
Qy 1 MAPYPYKVQTTVPELQYENFDGAKFGYMFWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLM 60
************************************************************
Db 61 DHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECKAKGIPLFMW 120
Qy 61 DHLSLNGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECKAKGIPLFMW 120
************************************************************
Db 121 GHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQIIAPLLAKFLPRVRI 180
Qy 121 GHSMGGGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQIIAPLLAKFLPRVRI 180
************************************************************
Db 181 DTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQRGAKLYKNENNYIQKNFAKD 240
Qy 181 DTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQRGAKLYKNENNYIQKNFAKD 240
***.*********************************************.**********
Db 241 KPVIIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDKVFNTVFNDMK 300
Qy 241 KPVVIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMK 300
*************
Db 301 QWLDKHTTTEAKP 313
Qy 301 QWLDKHTTTEAKP 313
RESULT 3
>RNU35245_1
(U35245|gid:none ) Rat vacuolar protein sorting homolog r-vps33b mR
DB 1; Score 72; Match 36.5%; QryMatch 4.4%; Pred. No. 3.54e-03;
Matches 19; Conservative 7; Mismatches 26; Indels 0; Gaps 0;
*** ** * . *.** **. * .** .* *. ** . *
Db 252 DDTFRIKCGSVDFGPEVTSSDKSLKVLLNAEDKVFSEIRNEHFSNVFGFLSQ 303
Qy 250 DDTINDPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMKQ 301
RESULT 4
>A53920(A53920)scaven
&CGU11453_1 (U11453|g &CGU11453_1 (U11453|g
DB 2; Score 70; Match 22.0%; QryMatch 4.2%; Pred. No. 1.05e-02;
Matches 20; Conservative 21; Mismatches 50; Indels 0; Gaps 0;
*. * * . ..* .. * * .** .. * .. .* . . * ** *
Db 69 FFEVVNPSEILKGEKPVVRERGPYVYREFRHKANITFNDNDTVSFVEHRSLHFQPDRSHG 128
Qy 29 FWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLMDHLSLNGYESFTFDQRGAGVTSPGRSKG 88
.* . .. . * *. *. * *
Db 129 SESDYIILPNILVLGGAVMMESKSAGLKLMM 159
Qy 89 VTDEYHVFNDLEHFVEKNLSECKAKGIPLFM 119
RESULT 5
>ROTCSP_1
(M91433|gid &ROTCSP_1 (M91433|gid
DB 2; Score 68; Match 31.3%; QryMatch 4.1%; Pred. No. 3.05e-02;
Matches 15; Conservative 10; Mismatches 23; Indels 0; Gaps 0;
** **. ** * ..* .*. .. * . * ***.. *
Db 406 DPTGSQSNFGSAVSAALMLIVFPTDEQSMSNITFDNLCNLVFNELIAW 453
Qy 255 DPKGSEKFIQDCPSADKELKLYPGARHSIFSLETDEVFNTVFNDMKQW 302
RESULT 6
>VACH3K_5
(D00382|gid &VACH3K_5 (D00382|gid &WMVZK4(JS0214)K4 pro &Y5K3_VACCV (
DB 3; Score 67; Match 38.2%; QryMatch 4.1%; Pred. No. 5.17e-02;
Matches 13; Conservative 11; Mismatches 9; Indels 1; Gaps 1;
..*.*.* **.* . ***** .* ... *.
Db 7 NREIKIYEGAKHHLHK-ETDEVKKSVMKEIETWI 39
Qy 270 DKELKLYPGARHSIFSLETDEVFNTVFNDMKQWL 303
RESULT 7
>PBU42580_271
(U42580 &PBU42580_271 (U42580
DB 2; Score 63; Match 27.8%; QryMatch 3.8%; Pred. No. 4.03e-01;
Matches 32; Conservative 25; Mismatches 52; Indels 6; Gaps 6;
** * * * * .. * . * * .. . . **.. . .*.*. * *.*
Db 14 NGINIATIDYPGHGHSNGDRFE-VNFE-QIVSVAKEFVQEVKEDEVCGNVPIFIGGTSLG 71
Qy 66 NGYESFTFDQRGAGVTSPGRSKGVTDEYHVFNDLEHFVEKNLSECKAKGIPLFMWGHSMG 125
* . . . . *. *.. * *. * * * ** .. * * ** * *.
Db 72 GAVA-SKMLELE-KDARHGFLIS-PMYQL-PKTFVNKIGFVVVPFLTKFFPNARV 122
Qy 126 GGICLNYACQGKHKNEISGYIGSGPLIILHPHTMYNKPTQIIAPLLAKFLPRVRI 180
RESULT 8
>ECXTHA_1
(X13002|gid &ECXTHA_1 (X13002|gid
DB 3; Score 62; Match 41.7%; QryMatch 3.8%; Pred. No. 6.65e-01;
Matches 10; Conservative 6; Mismatches 8; Indels 0; Gaps 0;
*. *.* **.. .* **.**
Db 126 AQFYQNLQNYLETELKRDNPVLIM 149
Qy 223 AKLYKNENNYIQKNFAKDKPVVIM 246
RESULT 9
>B64147(B64147)hypoth
&HEAHI0282_1 (L44927| &HIU00072_15 (U00072| &HIU32714_8 (
DB 2; Score 62; Match 30.9%; QryMatch 3.8%; Pred. No. 6.65e-01;
Matches 17; Conservative 11; Mismatches 25; Indels 2; Gaps 2;
* * .. . . * * *. *.*.** * * ** * . .. . * * *
Db 48 FEDSAEYLAQQIKSAVKNG-PYFLVGYSLGGRIALYYALQAQLERSNLQGVILEG 101
Qy 96 FNDLEHFVEKNLSECKAKGIPLFMWGHSMGGGICLNYACQGK-HKNEISGYIGSG 149
RESULT 10
>ECOXTH_1
(M22592|gid &ECOXTH_1 (M22592|gid &EX3_ECOLI (P09030) E &NCECX3(A3183
DB 2; Score 62; Match 41.7%; QryMatch 3.8%; Pred. No. 6.65e-01;
Matches 10; Conservative 6; Mismatches 8; Indels 0; Gaps 0;
*. *.* **.. .* **.**
Db 126 AQFYQNLQNYLETELKRDNPVLIM 149
Qy 223 AKLYKNENNYIQKNFAKDKPVVIM 246
RESULT 11
>MMU37799_1
(U37799|g &MMU37799_1 (U37799|g
DB 1; Score 62; Match 22.0%; QryMatch 3.8%; Pred. No. 6.65e-01;
Matches 20; Conservative 18; Mismatches 53; Indels 0; Gaps 0;
*. * * . *. .. * * .** .. * .. .* . . * .* *
Db 69 FFEVVNPNEVLNGQKPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLHFQPDKSHG 128
Qy 29 FWPVQNGTNEVRGRVLLIHGFGEYTKIQFRLMDHLSLNGYESFTFDQRGAGVTSPGRSKG 88
.* * .. * * * . * *
Db 129 SESDYIVLPNILVLGGSILMESKPVSLKLMM 159
Qy 89 VTDEYHVFNDLEHFVEKNLSECKAKGIPLFM 119
RESULT 12
>JC4080(JC4080)pyruva
&ODPB_SCHPO (Q09171) &SPDNAPD_1 (X75648|gi &SPDNAPD_1 (X
DB 3; Score 60; Match 37.8%; QryMatch 3.6%; Pred. No. 1.78e+00;
Matches 17; Conservative 4; Mismatches 24; Indels 0; Gaps 0;
** .* ** ** *. *** . * * ** * *.
Db 68 YNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPI 112
Qy 160 YNKPTQIIAPLLAKFLPRVRIDTGLDLKGITSDKAYRAFLGSDPM 204
RESULT 13
>CEK04G2_2
(Z75712|gid:none ) Caenorhabditis elegans cosmid K04G2; K04G2;2; Sim
DB 3; Score 60; Match 31.7%; QryMatch 3.6%; Pred. No. 1.78e+00;
Matches 13; Conservative 10; Mismatches 17; Indels 1; Gaps 1;
* ...** ** . * . **.. . * . *** *.
Db 320 PTLVIHGTDDEVIDFSHGVSIYERCPTSVEPLWV-PGAGHN 359
Qy 242 PVVIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHS 282
RESULT 14
>PFU12537_1
(U12537|g &PFU12537_1 (U12537|g
DB 2; Score 60; Match 37.8%; QryMatch 3.6%; Pred. No. 1.78e+00;
Matches 14; Conservative 6; Mismatches 17; Indels 0; Gaps 0;
** **. . *..** ** . **.** *
Db 23 VLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFG 59
Qy 43 VLLIHGFGEYTKIQFRLMDHLSLNGYESFTFDQRGAG 79
RESULT 15
>ESTE_PSEFL
(P22862) ARYLESTERASE (EC 3.1.1.2) (ARYL-ESTER HYDROLASE).
DB 1; Score 60; Match 37.8%; QryMatch 3.6%; Pred. No. 1.78e+00;
Matches 14; Conservative 6; Mismatches 17; Indels 0; Gaps 0;
** **. . *..** ** . **.** *
Db 22 VLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFG 58
Qy 43 VLLIHGFGEYTKIQFRLMDHLSLNGYESFTFDQRGAG 79
RESULT 16
>H23701(H23701)olfact
&OLF9_RAT (P23272) OL &RATOLFPRON_1 (M64388 &RATOLFPRON_1
DB 1; Score 60; Match 40.0%; QryMatch 3.6%; Pred. No. 1.78e+00;
Matches 10; Conservative 6; Mismatches 9; Indels 0; Gaps 0;
* ** * **.. .* **...*
Db 185 LKVACSDTHDNELAIFILGGPIVVL 209
Qy 130 LNYACQGKHKNEISGYIGSGPLIIL 154
RESULT 17
>S51294(S51294;
S5956 &SCRPD3COS_10 (Z46259 &SCRPD3COS_10 (Z46259 &YNOG_YEAST (
DB 3; Score 58; Match 26.7%; QryMatch 3.5%; Pred. No. 4.64e+00;
Matches 12; Conservative 11; Mismatches 22; Indels 0; Gaps 0;
. . * . . * * * * * . ***..*.. .* *.
Db 218 SSETPFLFLSGLKDEIVPPFHMRKLYETCPSSNKKIFEFPLGSHN 262
Qy 238 AKDKPVVIMHGQDDTINDPKGSEKFIQDCPSADKELKLYPGARHS 282
RESULT 18
>STU02497_1
(U02497|g &STU02497_1 (U02497|g
DB 3; Score 58; Match 37.5%; QryMatch 3.5%; Pred. No. 4.64e+00;
Matches 15; Conservative 5; Mismatches 20; Indels 0; Gaps 0;
.* **** * * .*. ** . * ** * *.
Db 27 ILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTT 66
Qy 43 VLLIHGFGEYTKIQFRLMDHLSLNGYESFTFDQRGAGVTS 82
RESULT 19
>BAU57319_1
(U57319|gid:none ) Brucella abortus arginine catabolism operon: arg
DB 3; Score 58; Match 29.6%; QryMatch 3.5%; Pred. No. 4.64e+00;
Matches 16; Conservative 11; Mismatches 27; Indels 0; Gaps 0;
.* ** .** **. . ** . * . . .** .**. * *.
Db 203 VAALLRRFLERVKAEDGLLHVSLDVDFLDPSIAPAVGTTVPGGATFREAHLIME 256
Qy 167 IAPLLAKFLPRVRIDTGLDLKGITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQ 220
RESULT 20
>U00014_20
(U00014|gi &U00014_20 (U00014|gi
DB 3; Score 58; Match 42.4%; QryMatch 3.5%; Pred. No. 4.64e+00;
Matches 14; Conservative 7; Mismatches 11; Indels 1; Gaps 1;
.*. ..* * * .** ** . *** **. *
Db 207 LTAKQSYHAILDADPASVEAKAAIRQI-DFLTR 238
Qy 189 ITSDKAYRAFLGSDPMSVPLYGSFRQIHDFMQR 221
Search completed: Thu Aug 15 03:14:38 1996
Job time : 30 secs.
----------------------------------------------
MPsrch E-mail Server on DISC
support@dna.affrc.go.jp (if you contact to staff)
MPsrch help document updated Aug.1 1996.
