SIM - Results of the Alignment

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Results of SIM with:

using the parameters:

Evaluate the significance of this protein sequence similarity score using PRSS at EMBnet-CH.

59.5% identity in 442 residues overlap; Score: 1164.0; Gap frequency: 3.6%

UserSeq1,      1 ITHIKARQIFDSRGNPTVEAEVTTANGVVSRAAVPSGASTGVYEALELRDGGSDYLG-KG
UserSeq2,      1 ITKIHARSVYDSRGNPTVEVDVVTETGL-HRAIVPSGASTGQHEAHELRDGDKTHWGGKG
                 ** * **   *********  * *  *   ** ********  ** *****     * **

UserSeq1,     60 VLKAVDNVNKIIGPALIGKDATEQTAIDIDFMFQQLDGTVNEWGWCKQKLGANAILAVSL
UserSeq2,     60 VLKAVENVNKTIAPAVIEENLDVKDQSKVDEFLKKLDGSAN-----KSNLGANAILGVSL
                 ***** **** * ** *            *     ***  *     *  ******* ***

UserSeq1,    120 AVCKAGASVKKIPLYKHIANLAGNPK-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA
UserSeq2,    115 AIAKAGAAEKGVPLYAHISDLAGTKKPYVLPVPFQNVLNGGSHAGGRLAFQEFMIVPSAA
                 *  ****  *  *** **  ***  *  *****  ** *******  ** ***** *  *

UserSeq1,    179 SSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAKAG
UserSeq2,    175 PSFSEALRQGAEVYQKLKTLAKKKYGQSAGNVGDEGGVAPDIQTAEEALDLITEAIEQAG
                  ** **   * ***  **   ****** * ******* ** **   * * *   **  **

UserSeq1,    239 Y---VVIGMDVAASEFYEKD--KDITNFKEENNDGSQKISADQLKDLYKSFVDEYPIVSI
UserSeq2,    235 YTGKMKIAMDVASSEFYKADVKKYDLDFKNPDSDSSKWLTYEQLADLYKTLASKYPIVSI
                 *     * **** ****  *  *    **    * *      ** ****     ******

UserSeq1,    294 EDPFDQDDWEHYSKLTAEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSV
UserSeq2,    295 EDPFAEDDWEAWSYFYKT--SDFQIVGDDLTVTNPLRIKKAIETKACNALLLKVNQIGTL
                 ****  ****  *          ******* **** *  ***  **************  

UserSeq1,    354 TESIEAVKMSKRAGWGVM-AHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQL
UserSeq2,    353 TESIQAAKDSYADNWGVMVSHRSGETEDVTIADIAVGLRSGQIKTGAPARSERLAKLNQI
                 **** * * *    ****  ********  ***  ***  ******** ******* ** 

UserSeq1,    413 LRIEEELGSEAVYAGANFRTPV
UserSeq2,    413 LRIEEELGNNAIYAGEKFRTSV
                 ********  * ***  *** *

28.6% identity in 42 residues overlap; Score: 37.0; Gap frequency: 2.4%

UserSeq1,    268 GSQKISADQLK-DLYKSFVDEYPIVSIEDPFDQDDWEHYSKL
UserSeq2,    237 GKMKIAMDVASSEFYKADVKKYDLDFKNPDSDSSKWLTYEQL
                 *  **  *      **  *  *         *   *  *  *

50.0% identity in 16 residues overlap; Score: 29.0; Gap frequency: 0.0%

UserSeq1,    233 AIAKAGYVVIGMDVAA
UserSeq2,    115 AIAKAGAAEKGVPLYA
                 ******    *    *

54.5% identity in 11 residues overlap; Score: 29.0; Gap frequency: 0.0%

UserSeq1,    106 KQKLGANAILA
UserSeq2,    416 EEELGNNAIYA
                    ** *** *

41.7% identity in 12 residues overlap; Score: 28.0; Gap frequency: 0.0%

UserSeq1,    184 AMKMGVEVYHHL
UserSeq2,    121 AAEKGVPLYAHI
                 *   **  * * 

42.9% identity in 14 residues overlap; Score: 28.0; Gap frequency: 0.0%

UserSeq1,    344 LLKVNQIGSVTESI
UserSeq2,    406 LAKLNQILRIEEEL
                 * * ***    *  

50.0% identity in 8 residues overlap; Score: 26.0; Gap frequency: 0.0%

UserSeq1,     96 DGTVNEWG
UserSeq2,     49 DGDKTHWG
                 **    **

28.6% identity in 21 residues overlap; Score: 25.0; Gap frequency: 0.0%

UserSeq1,    249 SEFYEKDKDITNFKEENNDGS
UserSeq2,    185 AEVYQKLKTLAKKKYGQSAGN
                  * * * *     *     * 

28.6% identity in 21 residues overlap; Score: 25.0; Gap frequency: 0.0%

UserSeq1,    216 FAPNIQENKEGLELLKTAIAK
UserSeq2,    177 FSEALRQGAEVYQKLKTLAKK
                 *        *    ***   *

27.7% identity in 47 residues overlap; Score: 25.0; Gap frequency: 0.0%

UserSeq1,     89 DFMFQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYK
UserSeq2,    314 DFQIVGDDLTVTNPLRIKKAIETKACNALLLKVNQIGTLTESIQAAK
                 **     * **      *      *  *  * *   *     *   *

62.5% identity in 8 residues overlap; Score: 25.0; Gap frequency: 0.0%

UserSeq1,    173 ILPVGASS
UserSeq2,     32 IVPSGAST
                 * * *** 

20.0% identity in 20 residues overlap; Score: 25.0; Gap frequency: 0.0%

UserSeq1,    318 IVGDDLLVTNPKRVEKAIKE
UserSeq2,     75 VIEENLDVKDQSKVDEFLKK
                      * *     *    * 

30.0% identity in 20 residues overlap; Score: 24.0; Gap frequency: 0.0%

UserSeq1,    403 SERLAKYNQLLRIEEELGSE
UserSeq2,    269 SSKWLTYEQLADLYKTLASK
                 *     * **      * * 

27.8% identity in 18 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,    318 IVGDDLLVTNPKRVEKAI
UserSeq2,    109 ILGVSLAIAKAGAAEKGV
                 * *  *        **  

55.6% identity in 9 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,    201 KKYGQDATN
UserSeq2,    256 KKYDLDFKN
                 ***  *  *

66.7% identity in 6 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,    353 VTESIE
UserSeq2,    226 ITEAIE
                  ** **

26.7% identity in 15 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,    199 IKKKYGQDATNVGDE
UserSeq2,    415 IEEELGNNAIYAGEK
                 *    *  *   *  

28.6% identity in 14 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,     89 DFMFQQLDGTVNEW
UserSeq2,    259 DLDFKNPDSDSSKW
                 *  *   *     *

35.7% identity in 14 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,    263 EENNDGSQKISADQ
UserSeq2,     77 EENLDVKDQSKVDE
                 *** *       * 

35.7% identity in 14 residues overlap; Score: 23.0; Gap frequency: 0.0%

UserSeq1,    406 LAKYNQLLRIEEEL
UserSeq2,    343 LLKVNQIGTLTESI
                 * * **     *