Methanococcus jannaschii Genome
Sequence Search
Query = Query
Database Name %Match %Id %Sim
Methanococcus_jannaschii_1070_main 100.0 100.0 100.0
Methanococcus_jannaschii_1070_main 74.6 73.8 86.5
Methanococcus_jannaschii_1070_main 2.4 33.3 55.6
Methanococcus_jannaschii_1070_main 2.2 63.2 68.4
Methanococcus_jannaschii_1070_main 2.1 29.2 47.7
Methanococcus_jannaschii_1070_main 2.1 34.3 51.4
Methanococcus_jannaschii_1070_main 2.0 32.7 49.1
Methanococcus_jannaschii_1070_main 2.0 33.3 48.7
Methanococcus_jannaschii_1070_main 2.0 45.0 60.0
Methanococcus_jannaschii_1070_main 1.9 39.3 57.1
Methanococcus_jannaschii_1070_main 1.9 43.5 65.2
Methanococcus_jannaschii_1070_main 1.9 52.6 63.2
Methanococcus_jannaschii_1070_main(1 - 1341 of 1341) 7/6/99
Query(1 - 447 of 447)
%Match = 100.0
%Identity = 100.0 %Similarity = 100.0
Matches = 447 Mismatches = 0 Conservative Sub.s = 0
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 1 [447, 0, 0]
atctggaagttggagattggagctggaaccaacaagaagagaaaaggaatggagagtaagggggagtttcgagtgtcagg
ttaaaagtataaaggattaaatctactgctaacctaattaataggtctatcgtaactacgctggacgtgcggatatctta
gattataatgttaaaggggattaaagattagcaatgaactctggcttacgaaaactagtattaagatctagagataataa
30 60 90 120 150 180 210 240
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVGGKACFCPGRELDLPIVE
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVGGKACFCPGRELDLPIVE
10 20 30 40 50 60 70 80
aggaaggaaaaagcagggggaggataaggactctctctaataggggtagtgcaggggagcgagggtgggatggcggaagg
acattcaatagttataaaaacttattaggaatttatccagtgtccaactccttgggcctacttactatattaccttacct
ctatttagtaagtataattcattgaccatgaaaaagaagggaatttcaaaggtaaaattgatttcttatgtcttaaaaat
270 300 330 360 390 420 450 480
NAEIIAEKIKRMVQIEEDDDTVVKLINGGKQLLLQLPSKRLRVAADYTVSALIGGGATVQAIVDAFDVDMFDAPVVKTAV
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
NAEIIAEKIKRMVQIEEDDDTVVKLINGGKQLLLQLPSKRLRVAADYTVSALIGGGATVQAIVDAFDVDMFDAPVVKTAV
90 100 110 120 130 140 150 160
agatccaggtcggaagattgccgttggtgtgtaaaagacagggaaaaatagggtgtatgcagatgagggtggtgatcttg
tggacactatagcatccttgcctttagtgagtgattcaattctcgaactactctccttaaccttacgactgctagtattg
ggacagaatcttttctaaaatatagaaatttgattgacttaatagaaagttttgaaagggcagtagattagataagcaat
510 540 570 600 630 660 690 720
MGRYPQTVDFHGANIATLLGPPVLLEGLGYGLRNIMANHIVAVTRKKTLNAVALASILEQTAMFETGDALGAFERLHLLG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MGRYPQTVDFHGANIATLLGPPVLLEGLGYGLRNIMANHIVAVTRKKTLNAVALASILEQTAMFETGDALGAFERLHLLG
170 180 190 200 210 220 230 240
tgtcgtagaatatgcgagagaggaggagggtgggagtggggaactaaactgtagtgcggtgttagtggtgtggggagagg
tctagtacaatcaattaaagaagctgcttccttagctaagttgctactccgtctaactagctgacacccgttcctttatg
aatgaatcccattgttgacagtaatatattattagtggtgcaaaaaagtttccttaattgtagtcttgatattatttttg
750 780 810 840 870 900 930 960
LAFQGLNANNLTYELVKENGKDGTVGTVVASVVERALEDGVIRPLKTMPSGFTVYEPVDWALWNAYAASGLVAAVIVNVG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LAFQGLNANNLTYELVKENGKDGTVGTVVASVVERALEDGVIRPLKTMPSGFTVYEPVDWALWNAYAASGLVAAVIVNVG
250 260 270 280 290 300 310 320
ggaggcgggtagcttagatgtgagtcaggtgagggagggtttttctatggggcgatcgacggaactagtgactggggatt
ccgccagtcccttaaaattaaacgtcgtatggcagcctgtcttcactaggggcgctagaattcgacagtctcgcccctgt
aagataaatatccccctcaacattgacttttgaggaattcacctcaataaagtaactaccctaacaaattcattatagta
990 1020 1050 1080 1110 1140 1170 1200
AARAAQGVASTVLYYNDILEYETGLPSVDFGRAEGTAVGFSFFSHSIYGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCL
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AARAAQGVASTVLYYNDILEYETGLPSVDFGRAEGTAVGFSFFSHSIYGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCL
330 340 350 360 370 380 390 400
gggacattggaatgtggagtagagctagccatggggggggagagaga
acgcattctagcccttgctagctaatgactaatcagctataaaaatt
caatagcataaaaaaaattttttccaaaaagtttattagtagaaaat
1230 1260 1290 1320
DAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
|||||||||||||||||||||||||||||||||||||||||||||||
DAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
410 420 430 440
Methanococcus_jannaschii_1070_main(768453 - 769781 of 1664970)
Query(1 - 443 of 447)
%Match = 74.6
%Identity = 73.8 %Similarity = 86.5
Matches = 327 Mismatches = 60 Conservative Sub.s = 56
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 3 [0, 0, 443]
agatagaaattggagatgggagctggaactcacaacatgaggaaagggatggagagtaagcgggagtaaagagtgtcagg
ttaaaactataaaagattaaatctactgctaacctaattaatagctctatcgtaactgcgatggaggttaggatatctta
gagcacaacgttaataaaaacttaaaccagccaatggatattgaagatcaattgctgattattaattgtatagataatta
768482 768512 768542 768572 768602 768632 768662 768692
MVKYKDTINLYDEKGKLVEENVPLEAISPLHNPTIQKLVKDVKRTVAVNLAGIENALRTGQVGGKGCMIKGRELDLPIVE
|: |:| |:||||:|||:|||||||||||| ||||:|:| |:||:||:|||||||||:|| |||| | ||||||||||
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVGGKACFCPGRELDLPIVE
10 20 30 40 50 60 70 80
aggaaggtggaggagtggggataataaggacaggcactaatgggggttgtgtgagcgtaggaaaatgggatggcagcggg
acactcaataattgtcaaaacctattaagaatctatccagtatccaactctttccactaacttgctatattaccttacct
ttaattactaattataatccaataatctaaggttataaggattaaatacttatataaaaatttaattttccttagttatt
768722 768752 768782 768812 768842 768872 768902 768932
NAETIAEYVEKVVRVSEDDDTSIKLINDGKQMAVQIPSKRLDVAAEYSVSVLVTAQALKEAIIRTFDVDIFDAPMVHAAV
||| ||| ::::|:: ||||| :|||| |||: :|:||||| |||:|:|| |: | :||: ||||:||||:| ||
NAEIIAEKIKRMVQIEEDDDTVVKLINGGKQLLLQLPSKRLRVAADYTVSALIGGGATVQAIVDAFDVDMFDAPVVKTAV
90 100 110 120 130 140 150 160
tggtccggaaagtaaggttgactttggcgtgtaaaagactggtaaaagaagggtggaagcagatgagggggttgatcttg
tggacaatctagcatccttggctctagcgactgattcaattcgcaaattactctccttaaccttatgactgttagtattg
atccacatagatacctaaatcaaaaagattgaaccgaccctatagatcgcatactatggaaagtagacttaataaacaat
768962 768992 769022 769052 769082 769112 769142 769172
LGGYPHEVTMKGSNIAALLGSPLSLEGPGYALRNIMANHFVACTKKNVMNAVAFAAIMEQTAMFEMGDAVGLFERLHLLG
:| ||: | |:||| ||| |: ||| || |||||||| || |:| :||||:|:|:||||||| |||:| ||||||||
MGRYPQTVDFHGANIATLLGPPVLLEGLGYGLRNIMANHIVAVTRKKTLNAVALASILEQTAMFETGDALGAFERLHLLG
170 180 190 200 210 220 230 240
tgtcgtaggatgagtgagagaagaggagggtgggagtggggaaggaatctgtattacggggatagtggggtggggagatg
tcaagtacaatttattacagaagctgcttccttagctaagttaaaactccgtataactatcagacacccgttcccttagg
aacaaacaccaatcataactgcatttaattcttaatagtactaacaaaaaatgacaattttggctctattatattaactg
769202 769232 769262 769292 769322 769352 769382 769412
LAYQGLNADNLVIDLVKANGKNGTVGTVVASVVERALEDGVIKEDKTLPSGFKLYKPVDVAKWNAYAAAGLVAAAIVNCG
||:|||||:|| :||| |||:||||||||||||||||||||: ||:|||| :|:||| | ||||||:||||| ||| |
LAFQGLNANNLTYELVKENGKDGTVGTVVASVVERALEDGVIRPLKTMPSGFTVYEPVDWALWNAYAASGLVAAVIVNVG
250 260 270 280 290 300 310 320
ggaggcaagtaatttagatgtgagtcgggtgagggagggttttactatggggcgatagacagaactagtgaccggggatt
ccgccaatcccttaaaattaaacgtcgtatggcagcctgtcttgactaggggcgttagaattcgacagtctcctccctgt
taaaagctaaacacccccaacaaaaaatcctaaataatacacctcatcaaagatcccaccctaacaaattcgatatagta
769442 769472 769502 769532 769562 769592 769622 769652
AARAAQNIASTILYYNDILEYETGLPGVDFGRAEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKGFAIPPVAAAMCL
|||||| :|||:|||||||||||||| ||||||||||||||||||||||||||| |:|||:||||||||||| ||||||
AARAAQGVASTVLYYNDILEYETGLPSVDFGRAEGTAVGFSFFSHSIYGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCL
330 340 350 360 370 380 390 400
gggacattcgaatgtggagtagaggtagctatgaaggtggagaatat
acgcattccagcccttgcttgctaatgactaattagctataaataat
ctaaggcaagaaaaatatcctattacagaggtcaaaaaatgcacact
769682 769712 769742 769772
DAGTQMFSPERTSALVGTVFSAIDEFREPLKYVIKGALEVKDKI*NF
|||||||| ||||||||||:|||| :||||||| :||:|||:|
DAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
410 420 430 440
Methanococcus_jannaschii_1070_main(528253 - 529554 of 1664970)
Query(13 - 98 of 447)
%Match = 2.4
%Identity = 33.3 %Similarity = 55.6
Matches = 30 Mismatches = 34 Conservative Sub.s = 20
Gaps = 6 InDels = 1056 Frame Shifts = 0
Primary Frame = 1 [84, 0, 0]
aattgagggatcaaagaaagggag ggtaatatcgaaaatagaagtaggagatagataaaatgatgac ggtgcata
aataatcagtaaaaaggtcaaatc attaatacccccgataatcacaagaattacttaatttagtgta tcataagg
tggtgtataatagaaagtaaagta atagaaataataaaatgttaagatggaaattatcaaagaaata gtttaatg
528243 528273 528300 528330 528360 528390 528891
NKLYEIADGIYQKKKGRITEEEIA-EVLKKLKSPATTRKLNEITESKEGKEILKAILNNIILERLGIQ~~~~VAYVQKCR
::|:: || : | : ||:| : :|:| |
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVA--------------------~~~~--------
10 20 30 40
cttagggagtgaaatggagggggggga gaagagtatcgactgaaagattagagtgtaagaaa gttgatagagatg
aatatgttataatatattagttgctac tgaagagtgcgactaataaattacaatgtacgtct attgctcatattc
gtgttatttaccttgtataatagttat acatgtgtcaagaatgtattaaataagtagagaaa ggagatatttcgt
528921 528951 528978 529008 529038 529068 529431 529461
QYLNVGVIDLDNINLDVIEGVVGAVET-VSKDRDWICPGKPLDKIKDNLLKAKELGLKTGITI~~~~ELLGTFTDIDILA
||| || |::| : |||: ||
------------INLAGIE---NALKTGAVGGKACFCPGRELD--------------------~~~~-------------
50 60 70
gaagtgaactagggaaaaagaaaagggcaga
gaattaaccataaatatggaatagtaatgaa
aaagagacacagagatatcattggtggtaat
529491 529521 529551
GKKVLEKTPYIEEEINISSENIKRVEELREN
| :| | :| |||: :: |:
-------LPIVENA-EIIAEKIKRMVQIEEDDDTVVKLINGGKQLLLQLPSKRLRVAADYTVSALIGGGAT
80 90 100 110 120 130
Methanococcus_jannaschii_1070_main(1022865 - 1022921 of 1664970)
Query(419 - 437 of 447)
%Match = 2.2
%Identity = 63.2 %Similarity = 68.4
Matches = 12 Mismatches = 6 Conservative Sub.s = 1
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 3 [0, 0, 19]
gatattttacattgaaaagaaagagtagccggctttcaacaggtagagtatgtggtggtcgatatgagggagcgaggtag
ttaatataattagaattacacattgttgactaactccttaacctaaagtaatatctattcaataattagcactgttgtat
atcttaaaaatatttgattaagttggtattaattcaatgctattataaatttttattggaatagtaatgtactaatatta
1022741 1022771 1022801 1022831 1022861 1022891 1022921 1022951
VIYNF*L*KLI*CDNMINAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV
|| | | | | |||| :||
YGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCLDAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
380 390 400 410 420 430 440
Methanococcus_jannaschii_1070_main(77102 - 77293 of 1664970)
Query(31 - 440 of 447)
%Match = 2.1
%Identity = 29.2 %Similarity = 47.7
Matches = 19 Mismatches = 33 Conservative Sub.s = 12
Gaps = 1 InDels = 1038 Frame Shifts = 0
Primary Frame = 2 [0, 64, 0]
aggctgcaataataatgaggtgggggtcttaaggacctgggaaaagaggagagcggtg
tgtctgagattcaatcgcacttagaatatgaacctaattaatagctttgtaccactta
tgtaaggagagccaaaattattagttaccttcaaagagttttgatttaggtatctcag
77041 77071 77101 77131 77161
IGVPLGQRKLMTYKISGTDAFVEGDDLHFCNNAAIQQLVDDIKRTVIVGMDTAHAVLE--------------------~~
| |:::|:||||:| : : |:
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVGGKACFCPGRELDLPI~~
10 20 30 40 50 60 70
aatggggacgaaagtagaaacgtcgggggcgcagggccgtgtgttgaatagaggtggg
agtgtatccactaaatactaactcggcttaaattatacgttgagacattcgaaatcaa
gaagagtaaaatcacgaatcctaatattcagcgtactatatgctctgacaattaatta
77209 77239 77269 77299 77329 77359
~~--------------------KRLGVEVTPETINEYMETINHALPGGAVVQEHMVEVHPGLVWDCYAKIFTGNDELADE
: : || | : |:| | | |||
~~HSKGFAIPCAAAAMCLDAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
400 410 420 430 440
agaattagaaagtcggcg
taagtttataaatcaaac
tcgataacataacaaaaa
77389
IDKRFLIDINKEFPEEQA
Methanococcus_jannaschii_1070_main(1486776 - 1486880 of 1664970)
Query(411 - 445 of 447)
%Match = 2.1
%Identity = 34.3 %Similarity = 51.4
Matches = 12 Mismatches = 17 Conservative Sub.s = 6
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 3 [0, 0, 35]
ctataggaacatctaccattgaaggtagtggataatgaaggtaaaaaaaaaatatcaaaagctatcagtatgtggagagg
ctaaatagactcttattaatatcatttataaaccttaatcaatgaatacgcaaaatgaggtctaattagatataataaac
atctataagaccaattgatgttttaaagttaccaataaatattacttaacaacataataacgaatatggtttgtgtgaga
1486676 1486706 1486736 1486766 1486796 1486826 1486856 1486886
PFNYKVERKPISLLNLLKYLDITDVLIEFDENSTIFEKIAEYIRNNIKTSTKYKYLRNRRVPLKYLIEWNFDLDEIEKEA
| : | | : : | ||||: | :: | ||
YGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCLDAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
380 390 400 410 420 430 440
Methanococcus_jannaschii_1070_main(719366 - 719953 of 1664970)
Query(14 - 67 of 447)
%Match = 2.0
%Identity = 32.7 %Similarity = 49.1
Matches = 18 Mismatches = 27 Conservative Sub.s = 9
Gaps = 1 InDels = 426 Frame Shifts = 0
Primary Frame = 2 [0, 54, 0]
aggtaatgttaataaaatgagataggagttatggagaaaaagaacaataaagacaaagaagaatattggatgtac a
ttctctcataacagtgtaaagtttagtctaggaataaccaaaaaacttatagtcaatttaattaattggtaaaca c
agatattgttactgaaccaagagtgttattcgagtaaattgcataaaaatacttgaaatcaataacagatttata t
719356 719386 719416 719446 719476 719506 719536 719860
IVAFTISEFYKTYRIRIYEKGILIEGIAFYSWEEIEKTTNKDKNQTILKIKGIPKKIVINEII*KFLGGIYD*TQ~~~~T
| :: |: : :| |: ||| | | : : ||
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIEN--------------------~~~~-
10 20 30 40 50
gttatgaagcaaggggataacaggaggggatctcaatggtagaagattaggtgaccaataggtgataaatc
atataggaagggaaaagtgttaaggtggatgacacactaggcccaggagagtgaaccaatgggcaggtgaa
ttaaggctggaaggagctagtatcataagtcaaacaatgggaaagtctcgctcaacctttcaaccgctaga
719890 719920 719950 719980 720010 720040 720070
DF*I*GSNERRREEEESFRMLKDGRVGGEICQSQTKSVEWRATTESCYSEGFGKQPTNYIGG*ANWSIR*Q
|| | |||: |
-------------------ALKTGAVGGKACFCPGRELDLPIVENAEIIAEKIKRMVQIEEDDDTVVKLIN
60 70 80 90 100
Methanococcus_jannaschii_1070_main(573970 - 574086 of 1664970)
Query(409 - 447 of 447)
%Match = 2.0
%Identity = 33.3 %Similarity = 48.7
Matches = 13 Mismatches = 20 Conservative Sub.s = 6
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 1 [39, 0, 0]
aggggaagtatcgtgaattcaggactacggaagggattggaggcggaagggtaggggaaagtccgaagagaaaagagaaa
gataatactatcttcaatgcacgactatgatatctagggtttacgatttgagagttttaaactcattaacaataaaagat
gttataatagcattaatccttagatattagataagttttgataaatttgacctagataaaattagttattataagaaaat
573876 573906 573936 573966 573996 574026 574056 574086
RDVEDIKALKFPVFAKNFCPNAGKPLNLGEINVAVNCCGVIVEPGDIIVGDCNGVVVIKKESLPEIIENAKNIKEKERKI
|| :|| : :| | : | | :||||: |
YGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCLDAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
380 390 400 410 420 430 440
Methanococcus_jannaschii_1070_main(620807 - 620866 of 1664970)
Query(4 - 23 of 447)
%Match = 2.0
%Identity = 45.0 %Similarity = 60.0
Matches = 9 Mismatches = 8 Conservative Sub.s = 3
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 2 [0, 20, 0]
acctgaaagctattgataagggcaaaacgggttggatagtgggtgatgaacgtaacgtgggag
aataaagaataaataattaaaccatcatcgtctgcgttgtcggtaatcatcccctattgcaac
tcataagggatctaaaggcaatattaattttcaagaaatataaggagtggttaaaatattggt
620827 620857 620887 620917 620947 620977
NHLYEKRKELYNYLEKLMNEEAPNITKLAGVSLGARLIGLAGGLEKLAKMPASTIQVLGAEKA
|| | :||: ||: | |
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVG
10 20 30 40 50 60
Methanococcus_jannaschii_1070_main(984990 - 985073 of 1664970)
Query(420 - 447 of 447)
%Match = 1.9
%Identity = 39.3 %Similarity = 57.1
Matches = 11 Mismatches = 12 Conservative Sub.s = 5
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 3 [0, 0, 28]
ccagaaccgtgtagcgaacggaatggaatgtggtaggtgggaattcgaaagctggaacaagcgaaggaggaaaagtcata
aaacataatctttgcagtctagtccgatgcttgtaacccgactgccaattactactcatgacttctctacaacaatcatt
gagagtgaatccggtgataatctaaacctaattgggaaaaaactcacaatgatgaatcctgattacttaagcaataaaat
984863 984893 984923 984953 984983 985013 985043 985073
QQKAKIQQVSVFMGPERIPVDSISAGNICALVGLKEASAGETICSPDKIIEPFEAITHISEPVITVAIEAKNTKDLPKLI
: || |: ||: || | |: |:|
YGGGGPGTFHGNHVVTRHSKGFAIPCAAAAMCLDAGTQMFSVERTSALVGTVYSAIDHLREPLKYVAEGAVEVKEKEKVI
380 390 400 410 420 430 440
Methanococcus_jannaschii_1070_main(167320 - 167388 of 1664970)
Query(28 - 50 of 447)
%Match = 1.9
%Identity = 43.5 %Similarity = 65.2
Matches = 10 Mismatches = 8 Conservative Sub.s = 5
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 1 [23, 0, 0]
ttattaatataattgttctttttttacacaaacaaaaaaaaaagtatacccttttaatttttttatatacggttgattta
ctgtcttctctttattttctctaaacccctaccctagtaatttcctttctattatatgtttaacttttttatatacattt
taatgatctaacactctttctagacttaacgcataaataattcacgaatttcctgttctattctaaatctgatgtattat
167268 167298 167328 167358 167388 167418 167448 167478
SLRFSIISISIILYVFFLSFSL**YTPTPIKTPTIKRIKKIIIASMLIPLHFFYLNICFLFYYSILIFILEVYLDTYFLI
:|:| |||::| | |: | |
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVGGKACFCPGRELDLPIVE
10 20 30 40 50 60 70 80
gttatataag
ttctcatcta
agacataata
167508
VLSISNLTIE
NAEIIAEKIK
90
Methanococcus_jannaschii_1070_main(318277 - 318333 of 1664970)
Query(5 - 23 of 447)
%Match = 1.9
%Identity = 52.6 %Similarity = 63.2
Matches = 10 Mismatches = 7 Conservative Sub.s = 2
Gaps = 0 InDels = 0 Frame Shifts = 0
Primary Frame = 1 [19, 0, 0]
ggaaggaaacaggaaagatgaccgatgagcgggagtgtagaactgaggtgagttgcgggatga
gaataattctcaagactataatcatatgtaaacagtttctaacaacatacataaccagaaaac
ttagacgtttacaagacatattaatttatttacatatattgttctgtattagtttttaattct
318294 318324 318354 318384 318414 318444
GDKMEDMITLTDERKTVKFENLPEIYVRVHDEAKGLVLTVKNPYDTDVYAKVYYAPDGENYDT
|| | | ||| : ||:|
MLHYEDRIDLYDERGKLLEENVPLEAISPLKNPTIEKIVNDIKRSVAINLAGIENALKTGAVG
10 20 30 40 50 60
 |
| |
|
|
|
|
