BLASTP+BEAUTY searches

BLASTP Multiple Sequence Alignment View searches

BLAST search of the National Center for Biotechnology Information's NR Protein Database provided by the Human Genome Center, Baylor College of Medicine.

Choose a program to use and database to search:

Program Database Perform ungapped alignment

The query sequence is filtered for low complexity regions by default.

Enter the sequence here in FASTA format:

Advanced options for the BLAST server:

Expect (e) Protein Filter (F)
Cost to open a gap (G) Cost to extend a gap (E) X dropoff value (X)
Threshold for Extending Hits (f)
Matrix (M)

Regulating output:

Descriptions (v) and Alignments (b) NCBI_gi (I)
Alignment View (m)

Credits:
NCBI BLAST: Tom Madden(madden@ncbi.nlm.nih.gov), Sergei B. Shavirin (shavirin@ncbi.nlm.nih.gov), and Jinghui Zhang (zjing@ncbi.nlm.nih.gov)
BEAUTY Post-processing:Kim C. Worley and Pamela A. Culpepper (Email)