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tRNA-SE searches

Search for tRNA genes in a genomic sequence using Washington University Department of Genetics: tRNAscan-SE with processing provided by Human Genome Center, Baylor College of Medicine.

Program:
Search Mode: Source:
Sequence:

Paste your Fasta-formatted query sequence(s) here:
Extended Options:
Disable pseudo gene checking
Show origin of first-pass hits
Display results in ACeDB format
Show codons instead of tRNA anticodons
Show false positives from tRNAscan/EufindtRNA
Show primary and secondary structure components to Cove scores
Genetic Code for tRNA Isotype Prediction:
Default cut-off values: (Change only for exceptional conditions.)
Cove score cutoff:
EufindtRNA search parameters:
Intermediate score cutoff:
Jun 16 15:17:07 CDT 1998
Credits:
Washington University Department of Genetics: Sean Eddy(eddy@genetics.wustl.edu),Todd Lowe(lowe@genetics.wustl.edu)
tRNA-SE processing: Kim C. Worley, Michael P. McLeod and Zhenwu Yang (Email)

 
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This document last modified 19 Aug 2003
This document's location: http://searchlauncher.bcm.tmc.edu/seq-search/Options/trna-se.html
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