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Site Search
Start Search Launcher:
- Nucleic Acid Search
- General Protein Search
- Species Protein Search
- Multiple Sequence Alignment
- Pairwise Sequence Alignment
- Gene Features Searches
- Sequence Utilities
- Protein Structure Prediction
Other Services
- BCM Human Transcript Database
- BCM Gene Finder
- BCM Protein Structure Prediction
Choose a type of search from the pull-down menu
BCM Search Launcher: Pairwise Sequence Alignment
Cut and paste first sequence in Fasta format here:
Cut and paste second sequence in Fasta format here:
Email address (when required):
Choose search method:
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[O]
[P]
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[H]
:Help/description;
[O]
:full Options form;
[P]
:search Parameters;
[E]
:Example search
SIM
(Protein only) - k best non-intersecting alignments (EXPASY) [
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ALIGN
- optimal global alignment with no short-cuts (EERIE) [
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LALIGN
- calculates the N-best local alignments (EERIE) [
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BLAST 2
- local alignment using BLAST (NCBI) [
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LAP2
- local DNA to protein alignment with LAP2 (MTU) [
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The following servers return search results via Email:
PGWISE
- comparisons of protein to genomic DNA (Pasteur) [
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PCWISE
- comparisons of protein to cDNA (Pasteur) [
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HGSC
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